RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 IDH2P48735 452 aaKnown RBP11□□□□□ -0.65
SCAF11-208ENST00000546534 DNAJB13P59910 316 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 PLAURQ03405 335 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 ARHGAP11BQ3KRB8 267 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 LSM12Q3MHD2 195 aaKnown RBP11□□□□□ -0.65
SCAF11-208ENST00000546534 C3orf36Q3SXR2 165 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 ATP6AP1LQ52LC2 224 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 OTUD3Q5T2D3 398 aaPredicted RBP11□□□□□ -0.65
SCAF11-208ENST00000546534 FAHD2BQ6P2I3 314 aaPredicted RBP11□□□□□ -0.65
SCAF11-208ENST00000546534 EMBQ6PCB8 327 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 PAQR6Q6TCH4 344 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF572Q7Z3I7 529 aaPredicted RBP11□□□□□ -0.65
SCAF11-208ENST00000546534 ABHD12BQ7Z5M8 362 aaPredicted RBP11□□□□□ -0.65
SCAF11-208ENST00000546534 MYPOPQ86VE0 399 aaPredicted RBP11□□□□□ -0.65
SCAF11-208ENST00000546534 OR9K2Q8NGE7 335 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 ACMSDQ8TDX5 336 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 FAHD2AQ96GK7 314 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 ANKRD27Q96NW4 1050 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 JMJD8Q96S16 334 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF747Q9BV97 191 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 RACGAP1Q9H0H5 632 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 TPK1Q9H3S4 243 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 TREM2Q9NZC2 230 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 GIMAP2Q9UG22 337 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 DCDC2Q9UHG0 476 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 PCDHGB4Q9UN71 923 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 SLC35A3Q9Y2D2 325 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 TMED7Q9Y3B3 224 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 A0A096LPE4 126 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 A0A1W2PPZ6 126 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 TMEM72A0PK05 275 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 ZC3H12DA2A288 527 aaKnown RBP10.99□□□□□ -0.65
SCAF11-208ENST00000546534 DUXAA6NLW8 204 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 WNT9BO14905 357 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 CFLARO15519 480 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 AK1P00568 194 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 PROCP04070 461 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 CELA3BP08861 270 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 GAAP10253 952 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 SOAT1P35610 550 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 RPL3P39023 403 aaKnown RBP10.99□□□□□ -0.65
SCAF11-208ENST00000546534 GPR6P46095 362 aaPredicted RBP10.99□□□□□ -0.65
SCAF11-208ENST00000546534 HBA1P69905 142 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 ELFN2Q5R3F8 820 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 AP1ARQ63HQ0 302 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 SHISA2Q6UWI4 295 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 RNF165Q6ZSG1 346 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 LINGO2Q7L985 606 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 HMGN2P46Q86SG4 172 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 CLEC4FQ8N1N0 589 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 TMEM99Q8N816 258 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 FAM169BQ8N8A8 192 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 OR51F2Q8NH61 342 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 MAGEE2Q8TD90 523 aaPredicted RBP10.99□□□□□ -0.65
SCAF11-208ENST00000546534 DDIT4LQ96D03 193 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 COQ8BQ96D53 544 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 FMO2Q99518 471 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 NELFAQ9H3P2 528 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 OSGIN1Q9UJX0 560 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 PYCARDQ9ULZ3 195 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 DNAJC15Q9Y5T4 150 aa10.99□□□□□ -0.65
SCAF11-208ENST00000546534 LOC105371242A0A075B767 164 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 IGHV2OR16-5A0A0B4J2B6 119 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 A0A0G2JK05 382 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 OR6C65A6NJZ3 312 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 CLDN24A6NM45 220 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 TMEM114B3SHH9 223 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF587BE7ETH6 402 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 AP3D1O14617 1153 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF208O43345 1280 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 AKR7A3O95154 331 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 IGKV3-15P01624 115 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 TFP02787 698 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 SAGP10523 405 aaPredicted RBP10.98□□□□□ -0.65
SCAF11-208ENST00000546534 COL8A2P25067 703 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 CASQ1P31415 396 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 HTR3AP46098 478 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 PTGR1Q14914 329 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 C16orf62Q7Z3J2 963 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 C6orf120Q7Z4R8 191 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 ARFGAP2Q8N6H7 521 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 KRTCAP2Q8N6L1 136 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 MZB1Q8WU39 189 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 IFT81Q8WYA0 676 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 PMM1Q92871 262 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 ZG16BQ96DA0 208 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF317Q96PQ6 595 aaPredicted RBP10.98□□□□□ -0.65
SCAF11-208ENST00000546534 ALKBH3Q96Q83 286 aaPredicted RBP10.98□□□□□ -0.65
SCAF11-208ENST00000546534 SF3B5Q9BWJ5 86 aaKnown RBP10.98□□□□□ -0.65
SCAF11-208ENST00000546534 ESM1Q9NQ30 184 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 EXOSC3Q9NQT5 275 aaKnown RBP10.98□□□□□ -0.65
SCAF11-208ENST00000546534 ATAD3AQ9NVI7 634 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 OXSMQ9NWU1 459 aa10.98□□□□□ -0.65
SCAF11-208ENST00000546534 A0A1W2PPM1 405 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 PLIN3O60664 434 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 CHEK2O96017 543 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 PNPP00491 289 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 HPXP02790 462 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 CBR1P16152 277 aa10.97□□□□□ -0.65
SCAF11-208ENST00000546534 TACR3P29371 465 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms