RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	CA5B	Q9Y2D0	317 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	HIF3A	Q9Y2N7	669 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	TCRBV21S2A2	A0A5A6	115 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	GABARAP	H6UMI1	98 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	NARS	O43776	548 aa	Known RBP	11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	TXNDC12	O95881	172 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	PAH	P00439	452 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	CD14	P08571	375 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR10A3	P58181	314 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	DCAF7	P61962	342 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	RACK1	P63244	317 aa	Known RBP	11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	COL28A1	Q2UY09	1125 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	KLHL26	Q53HC5	615 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	ELFN2	Q5R3F8	820 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	TMEFF1	Q8IYR6	380 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	BCORP1	Q8N888	145 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	MOSPD2	Q8NHP6	518 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	ANGPTL6	Q8NI99	470 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	HGD	Q93099	445 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	MED30	Q96HR3	178 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	DDO	Q99489	341 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	CAPN10	Q9HC96	672 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	NUDT15	Q9NV35	164 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	KLHL9	Q9P2J3	617 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	HSPB11	Q9Y547	144 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669		V9GY05	133 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	TRABD2B	A6NFA1	517 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	IFITM5	A6NNB3	132 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	SCD	O00767	359 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	HIST1H2AB	P04908	130 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	CLU	P10909	449 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	ATF1	P18846	271 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	PLAUR	Q03405	335 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	IKZF1	Q13422	519 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	SLC25A35	Q3KQZ1	300 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	CEP78	Q5JTW2	689 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	BCL2L15	Q5TBC7	163 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	FCRLB	Q6BAA4	426 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	LYPD4	Q6UWN0	246 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	HIST3H2A	Q7L7L0	130 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZAR1	Q86SH2	424 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	PARG	Q86W56	976 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	SIAH3	Q8IW03	269 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	SDR16C5	Q8N3Y7	309 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	DNAJC5G	Q8N7S2	189 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	FAM71C	Q8NEG0	241 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR2T4	Q8NH00	348 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZNF431	Q8TF32	576 aa	Predicted RBP	11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	FCAMR	Q8WWV6	532 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	HIST1H2AC	Q93077	130 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZFP3	Q96NJ6	502 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	SLC46A1	Q96NT5	459 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	GALNT9	Q9HCQ5	603 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	TCF7L1	Q9HCS4	588 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	PLSCR3	Q9NRY6	295 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	GPR27	Q9NS67	375 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	MMACHC	Q9Y4U1	282 aa		11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	MDC1	Q14676	2089 aa	Known RBP	11.94	□□□□□ -0.5
CPSF7-223	ENST00000544669	MCIDAS	D6RGH6	385 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	TGM6	O95932	706 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	TF	P02787	698 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	NGFR	P08138	427 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	THEGL	P0DJG4	465 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	CT45A8	P0DMV1	189 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	CT45A9	P0DMV2	189 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	ST6GAL1	P15907	406 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	GABRG2	P18507	467 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	SDHA	P31040	664 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	FAU	P35544	74 aa	Known RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	PPIC	P45877	212 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	CCR9	P51686	369 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	EPHA4	P54764	986 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	EGR3	Q06889	387 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	EIF2B5	Q13144	721 aa	Known RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	ELOC	Q15369	112 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	CLPP	Q16740	277 aa	Predicted RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	CT45A2	Q5DJT8	189 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	METTL11B	Q5VVY1	283 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	HDDC2	Q7Z4H3	204 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	CARF	Q8N187	725 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	C3orf49	Q96BT1	292 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	KLHDC7B	Q96G42	594 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	PEX11G	Q96HA9	241 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZNF285	Q96NJ3	590 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	ALG12	Q9BV10	488 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	PBX4	Q9BYU1	374 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	COMMD4	Q9H0A8	199 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	NANS	Q9NR45	359 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	SLC2A4RG	Q9NR83	387 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	TMEM74B	Q9NUR3	256 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	TAS2R8	Q9NYW2	309 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	SCP2D1	Q9UJQ7	156 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	PDE4DIP	Q5VU43	2346 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669		A0A0A6YYC8	382 aa	Predicted RBP	11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669	LILRA5	A6NI73	299 aa		11.93	□□□□□ -0.5
CPSF7-223	ENST00000544669		I3L1I5	382 aa	Predicted RBP	11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms