RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 MT-ND5P03915 603 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 HLA-DPB1P04440 258 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 CD14P08571 375 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 CD53P19397 219 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 EVI2BP34910 448 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 RPL4P36578 427 aaKnown RBP12.89□□□□□ -0.35
LDB3-207ENST00000542786 DCDP81605 110 aaKnown RBP12.89□□□□□ -0.35
LDB3-207ENST00000542786 E2F1Q01094 437 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 MXD1Q05195 221 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 IL10RAQ13651 578 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 CLPPQ16740 277 aaPredicted RBP12.89□□□□□ -0.35
LDB3-207ENST00000542786 LINC01590Q5TEZ4 76 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 C16orf47Q6ZP98 133 aaPredicted RBP12.89□□□□□ -0.35
LDB3-207ENST00000542786 MARCH9Q86YJ5 346 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 C1orf210Q8IVY1 113 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 LAX1Q8IWV1 398 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 GALNT6Q8NCL4 622 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 IFI44Q8TCB0 444 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 TAAR8Q969N4 342 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 NMNAT3Q96T66 252 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 SLC26A1Q9H2B4 701 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 SLC6A5Q9Y345 797 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 USP34Q70CQ2 3546 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 ASCC3Q8N3C0 2202 aaKnown RBP12.88□□□□□ -0.35
LDB3-207ENST00000542786 MPDZO75970 2070 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 FUOMA2VDF0 154 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 LOC110117498-PIK3R3F6TDL0 507 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 NTN3O00634 580 aaPredicted RBP12.88□□□□□ -0.35
LDB3-207ENST00000542786 CDC40O60508 579 aaKnown RBP eCLIP12.88□□□□□ -0.35
LDB3-207ENST00000542786 PFDN1O60925 122 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 NPIPB7O75200 414 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 FGF5P12034 268 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 SPI1P17947 270 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 GTF2E2P29084 291 aaKnown RBP12.88□□□□□ -0.35
LDB3-207ENST00000542786 CDKN2AP42771 156 aaKnown RBP12.88□□□□□ -0.35
LDB3-207ENST00000542786 SLC25A1P53007 311 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 SLC35D3Q5M8T2 416 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 VASH1Q7L8A9 365 aaPredicted RBP12.88□□□□□ -0.35
LDB3-207ENST00000542786 BMPERQ8N8U9 685 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 POMGNT2Q8NAT1 580 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 NUBPLQ8TB37 319 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 GPR119Q8TDV5 335 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 PPP1R14BQ96C90 147 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 Q96M85 177 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 PTDSS2Q9BVG9 487 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 HDHD5Q9BXW7 423 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 TBL1XR1Q9BZK7 514 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 RNF32Q9H0A6 362 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 TPK1Q9H3S4 243 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 RERGLQ9H628 205 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 KLHL1Q9NR64 748 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 ABCB10Q9NRK6 738 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 OCIAD1Q9NX40 245 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 ST6GALNAC2Q9UJ37 374 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 GSTK1Q9Y2Q3 226 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 NOX1Q9Y5S8 564 aa12.88□□□□□ -0.35
LDB3-207ENST00000542786 AGRPO00253 132 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 PLPP2O43688 288 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 SC5DO75845 299 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 RGS9O75916 674 aaPredicted RBP12.87□□□□□ -0.35
LDB3-207ENST00000542786 HEXBP07686 556 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 GRK6P43250 576 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 BCAP31P51572 246 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 SLC16A1P53985 500 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 OR12D2P58182 307 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 RPL18Q07020 188 aaKnown RBP12.87□□□□□ -0.35
LDB3-207ENST00000542786 ZNF79Q15937 498 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 SPANXN2Q5MJ10 180 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 C1QL3Q5VWW1 255 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 DMKNQ6E0U4 476 aaPredicted RBP12.87□□□□□ -0.35
LDB3-207ENST00000542786 TMEM205Q6UW68 189 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 GPALPP1Q8IXQ4 340 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 OR5J2Q8NH18 312 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 ZNF563Q8TA94 476 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 HGDQ93099 445 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 C4orf36Q96KX1 117 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 PGLYRP3Q96LB9 341 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 CNN2Q99439 309 aaKnown RBP12.87□□□□□ -0.35
LDB3-207ENST00000542786 FKRPQ9H9S5 495 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 TRIM36Q9NQ86 728 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 POLE4Q9NR33 117 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 NANSQ9NR45 359 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 ZNF229Q9UJW7 825 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 CMAHPQ9Y471 501 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 TEX13CA0A0J9YWL9 993 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 CD8B2A6NJW9 211 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 D6RAR5 112 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 CD8BP10966 210 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 PGCP20142 388 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 HCCSP53701 268 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 CDC20Q12834 499 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 DNASE1L3Q13609 305 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 CDONQ4KMG0 1287 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 LCN1P1Q5VSP4 162 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 MRPL14Q6P1L8 145 aaKnown RBP12.87□□□□□ -0.35
LDB3-207ENST00000542786 SLC22A16Q86VW1 577 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 OR51L1Q8NGJ5 315 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 DEPDC7Q96QD5 511 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 CCDC32Q9BV29 185 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 SLC7A5P2Q9GIP4 190 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms