RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 GSPT2Q8IYD1 628 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-214ENST00000542663 OR4A15Q8NGL6 344 aa15.44■□□□□ 0.06
CLSTN3-214ENST00000542663 EPS8L3Q8TE67 593 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-214ENST00000542663 BCL2L2Q92843 193 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-214ENST00000542663 PMM1Q92871 262 aa15.44■□□□□ 0.06
CLSTN3-214ENST00000542663 SF3B5Q9BWJ5 86 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-214ENST00000542663 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-214ENST00000542663 TMEM45AQ9NWC5 275 aa15.44■□□□□ 0.06
CLSTN3-214ENST00000542663 ZDHHC2Q9UIJ5 367 aa15.44■□□□□ 0.06
CLSTN3-214ENST00000542663 ARPC4-TTLL3A0A0A6YYG9 625 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 TMEM129A0AVI4 362 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 LIPT2A6NK58 231 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 AQP7P3A6NL99 342 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 AGR2O95994 175 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 SLC1A3P43003 542 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 SELENOPP49908 381 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 P2RY4P51582 365 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 HGFACQ04756 655 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 CEACAM7Q14002 265 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 C3orf36Q3SXR2 165 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 SAXO2Q658L1 398 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 ABHD12BQ7Z5M8 362 aaPredicted RBP15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 ZNF786Q8N393 782 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 NUP37Q8NFH4 326 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 NEU4Q8WWR8 484 aaPredicted RBP15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 ALKBH3Q96Q83 286 aaPredicted RBP15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 DOK1Q99704 481 aa15.43■□□□□ 0.06
CLSTN3-214ENST00000542663 hCG_2039718K7EN88 272 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 FAAHO00519 579 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 SNUPNO95149 360 aaKnown RBP15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 IGKV3-15P01624 115 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 CELA3BP08861 270 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 EGR1P18146 543 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 UQCRC2P22695 453 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 THBS4P35443 961 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 DVL1P1P54792 670 aaPredicted RBP15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 OR7A5Q15622 319 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 GPAT3Q53EU6 434 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 DEF8Q6ZN54 512 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 GPAT4Q86UL3 456 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 ANKRD46Q86W74 232 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 SVOPLQ8N434 492 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 OR8J2Q8NGG1 315 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 TUBGCP3Q96CW5 907 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 PIF1Q9H611 641 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 ZNF442Q9H7R0 627 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 ASIC5Q9NY37 505 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 SLC17A7Q9P2U7 560 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 METRNQ9UJH8 293 aa15.42■□□□□ 0.06
CLSTN3-214ENST00000542663 A0A096LPE4 126 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 A0A1W2PPZ6 126 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 ZNF587BE7ETH6 402 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 LYNX1G3V0Z9 82 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 HMGN4O00479 90 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 KCNAB3O43448 404 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 GPIP06744 558 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 LYNX1P0DP58 116 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 PAX7P23759 505 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 MAP2K6P52564 334 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 UBE2NP61088 152 aaKnown RBP15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 EMX2Q04743 252 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 CCNIQ14094 377 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 SYPL1Q16563 259 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 CMIPQ8IY22 773 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 OR4F15Q8NGB8 312 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 MAGEE2Q8TD90 523 aaPredicted RBP15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 ZFAND2BQ8WV99 257 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 APOPT1Q96IL0 206 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 SLC38A1Q9H2H9 487 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 OCEL1Q9H607 264 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 MKS1Q9NXB0 559 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 NOP53Q9NZM5 478 aaKnown RBP15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 FBXO9Q9UK97 447 aaPredicted RBP15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 PKD1L1Q8TDX9 2849 aa15.41■□□□□ 0.06
CLSTN3-214ENST00000542663 A0A0A6YYJ9 748 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 AGAP5A6NIR3 686 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 SLCO1B7G3V0H7 640 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 UPK3AO75631 287 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 KRT33AO76009 404 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 CPSF4O95639 269 aaKnown RBP15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 NPR2P20594 1047 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 RPS4Y1P22090 263 aaKnown RBP15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 COMPP49747 757 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 KHKP50053 298 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 EPS8Q12929 822 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 ADRM1Q16186 407 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 CREB3L2Q70SY1 520 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 CDK20Q8IZL9 346 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 FAM169BQ8N8A8 192 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 ANKFN1Q8N957 763 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 UBASH3BQ8TF42 649 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 WDR60Q8WVS4 1066 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 NEURL3Q96EH8 262 aa15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 ZNF317Q96PQ6 595 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 METTL17Q9H7H0 456 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-214ENST00000542663 PRSS51A0A1B0GVH4 220 aa15.39■□□□□ 0.05
CLSTN3-214ENST00000542663 SH3PXD2BA1X283 911 aa15.39■□□□□ 0.05
CLSTN3-214ENST00000542663 ZNF503-AS2A6NEH8 195 aa15.39■□□□□ 0.05
CLSTN3-214ENST00000542663 CHRM4P08173 479 aa15.39■□□□□ 0.05
CLSTN3-214ENST00000542663 IFNGR1P15260 489 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms