RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 TNFRSF13CQ96RJ3 184 aa12.9□□□□□ -0.34
CYB561A3-216ENST00000540755 DUSP21Q9H596 190 aa12.9□□□□□ -0.34
CYB561A3-216ENST00000540755 FKRPQ9H9S5 495 aa12.9□□□□□ -0.34
CYB561A3-216ENST00000540755 NANSQ9NR45 359 aa12.9□□□□□ -0.34
CYB561A3-216ENST00000540755 SACM1LQ9NTJ5 587 aa12.9□□□□□ -0.34
CYB561A3-216ENST00000540755 FBXL2Q9UKC9 423 aa12.9□□□□□ -0.34
CYB561A3-216ENST00000540755 BAIAP2Q9UQB8 552 aa12.9□□□□□ -0.34
CYB561A3-216ENST00000540755 VDAC3Q9Y277 283 aa12.9□□□□□ -0.34
CYB561A3-216ENST00000540755 A0A087WZY1 265 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 LRRN3E7EW58 273 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 SURF4O15260 269 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 ZNF208O43345 1280 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 PRKYO43930 277 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 NDUFB2O95178 105 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 ASAH2BP0C7U1 165 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 WT1P19544 449 aaPredicted RBP12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 CCNA2P20248 432 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 EEF1B2P24534 225 aaKnown RBP12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 SLC6A6P31641 620 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 CASRP41180 1078 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 PRPS1P60891 318 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 SLC35A2P78381 396 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 TUBA3CQ13748 450 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 INPP5JQ15735 1006 aaPredicted RBP12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 MEDAGQ5VYS4 303 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 THSD4Q6ZMP0 1018 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 MDGA2Q7Z553 956 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 ZNF227Q86WZ6 799 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 GALNT16Q8N428 558 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 PSD4Q8NDX1 1056 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 OR6S1Q8NH40 331 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 TMEM163Q8TC26 289 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 IL4I1Q96RQ9 567 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 CXorf56Q9H5V9 222 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 ANKRD10Q9NXR5 420 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 CHRNA9Q9UGM1 479 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 ZNF229Q9UJW7 825 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 HIF3AQ9Y2N7 669 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 PCDHGB1Q9Y5G3 927 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 MED13Q9UHV7 2174 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 HECTD1Q9ULT8 2610 aa12.89□□□□□ -0.35
CYB561A3-216ENST00000540755 TLX2O43763 284 aaPredicted RBP12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 TRIM3O75382 744 aaPredicted RBP12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 WISP1O95388 367 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 MT-ATP6P00846 226 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 BGLAPP02818 100 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 ADH6P28332 368 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 EIF1P41567 113 aaKnown RBP12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 MASP1P48740 699 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 LTBQ06643 244 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 NADK2Q4G0N4 442 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 ATP1A1-AS1Q5TC04 95 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 C1orf140Q5VVS0 124 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 TIGD3Q6B0B8 471 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 POMZP3Q6PJE2 187 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 LRRC17Q8N6Y2 441 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 ZNF540Q8NDQ6 660 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 OR1J4Q8NGS1 313 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 POC1BQ8TC44 478 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 TAAR8Q969N4 342 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 ZBTB8AQ96BR9 441 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 MOGAT1Q96PD6 335 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 GPX7Q96SL4 187 aaPredicted RBP12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 UTP23Q9BRU9 249 aaKnown RBP12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 PTDSS2Q9BVG9 487 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 IFT27Q9BW83 186 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 TIMMDC1Q9NPL8 285 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 FKBP14Q9NWM8 211 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 PAK1IP1Q9NWT1 392 aaPredicted RBP12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 LRFN1Q9P244 771 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 IL20RAQ9UHF4 553 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 PSORS1C1Q9UIG5 152 aa12.88□□□□□ -0.35
CYB561A3-216ENST00000540755 MAST4O15021 2626 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 ZC3H12DA2A288 527 aaKnown RBP12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 ARGFXA6NJG6 315 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 CLCA1A8K7I4 914 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 ZNF891A8MT65 544 aaPredicted RBP12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 PTGES3LE9PB15 166 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 NKX2-8O15522 239 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 OR2T1O43869 369 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 ENTPD6O75354 484 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 HTR1AP08908 422 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 TSPAN19P0C672 248 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 CD96P40200 585 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 RPS5P46782 204 aaKnown RBP12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 DSCR4P56555 118 aaPredicted RBP12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 OC90Q02509 493 aaPredicted RBP12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 FAM69AQ5T7M9 428 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 DPY19L2P2Q6ZN68 376 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 C10orf53Q8N6V4 93 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 PLEKHA8Q96JA3 519 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 NPAS1Q99742 590 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 POTEKPQ9BYX7 375 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 ENKD1Q9H0I2 346 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 FN3KQ9H479 309 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 SERINC1Q9NRX5 453 aa12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 CNOT2Q9NZN8 540 aaKnown RBP12.87□□□□□ -0.35
CYB561A3-216ENST00000540755 SNX5Q9Y5X3 404 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms