RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 RASSF5Q8WWW0 418 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 SLC41A3Q96GZ6 507 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 BOD1Q96IK1 185 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 SF3B5Q9BWJ5 86 aaKnown RBP12.15□□□□□ -0.46
CD9-208ENST00000538834 NSRP1Q9H0G5 558 aaKnown RBP12.15□□□□□ -0.46
CD9-208ENST00000538834 CACYBPQ9HB71 228 aaKnown RBP12.15□□□□□ -0.46
CD9-208ENST00000538834 GMPR2Q9P2T1 348 aaKnown RBP12.15□□□□□ -0.46
CD9-208ENST00000538834 ARL2BPQ9Y2Y0 163 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 FLVCR1Q9Y5Y0 555 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 CELSR1Q9NYQ6 3014 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 LOC102725191A0A1B0GVB3 256 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 A0A1W2PPR1 153 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 SH3D21A4FU49 640 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 DEFB108AA8MXU0 73 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 PDLIM1O00151 329 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 AIM2O14862 343 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 HRGP04196 525 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 PNMTP11086 282 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 CCNA2P20248 432 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 COX5AP20674 150 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 CRYGSP22914 178 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 CPA2P48052 419 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 RGS8P57771 180 aaPredicted RBP12.14□□□□□ -0.47
CD9-208ENST00000538834 OR2B6P58173 313 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 LTBQ06643 244 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 Q6ZT83 130 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 RBM45Q8IUH3 476 aaKnown RBP12.14□□□□□ -0.47
CD9-208ENST00000538834 TMEM45BQ96B21 275 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 CMTM5Q96DZ9 223 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 ZHX1-C8orf76Q96EF9 292 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 KTI12Q96EK9 354 aaPredicted RBP12.14□□□□□ -0.47
CD9-208ENST00000538834 SLC47A1Q96FL8 570 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 PRSS27Q9BQR3 290 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 TMEM43Q9BTV4 400 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 FANCFQ9NPI8 374 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 KLHL28Q9NXS3 571 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 GPR52Q9Y2T5 361 aa12.14□□□□□ -0.47
CD9-208ENST00000538834 ARID1AO14497 2285 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 MED13LQ71F56 2210 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 ELOVL7A1L3X0 281 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 M0R3H8 397 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 GPR171O14626 319 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 KLF4O43474 513 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 CDH12P55289 794 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 P2RY6Q15077 328 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 ALG10BQ5I7T1 473 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 SFRP5Q5T4F7 317 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 WDR88Q6ZMY6 472 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 GALNT5Q7Z7M9 940 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 OR2T12Q8NG77 320 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 TAAR8Q969N4 342 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 CCT8L2Q96SF2 557 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 MCHR1Q99705 422 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 NAA11Q9BSU3 229 aaPredicted RBP12.13□□□□□ -0.47
CD9-208ENST00000538834 HDHD5Q9BXW7 423 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 C12orf49Q9H741 205 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 PLEKHF2Q9H8W4 249 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 B3GAT1Q9P2W7 334 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 MALT1Q9UDY8 824 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 NDRG3Q9UGV2 375 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 PRSS50Q9UI38 385 aa12.13□□□□□ -0.47
CD9-208ENST00000538834 MAP1AP78559 2803 aaPredicted RBP12.13□□□□□ -0.47
CD9-208ENST00000538834 ELOA3DA6NLF2 546 aaPredicted RBP12.12□□□□□ -0.47
CD9-208ENST00000538834 CHP2O43745 196 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 OR2T1O43869 369 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 AKR7A3O95154 331 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 VAMP5O95183 116 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 FAM107AO95990 144 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 BGLAPP02818 100 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 PPP3CBP16298 524 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 CPOXP36551 454 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 GSK3BP49841 420 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 SLC7A2P52569 658 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 SELENOWP63302 87 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 LIPEQ05469 1076 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 OR7A5Q15622 319 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 ELOA3BQ3SY89 546 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 ENTPD8Q5MY95 495 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 OTUD3Q5T2D3 398 aaPredicted RBP12.12□□□□□ -0.47
CD9-208ENST00000538834 FAM69AQ5T7M9 428 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 PPP4R4Q6NUP7 873 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 STK32CQ86UX6 486 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 RANBP3LQ86VV4 465 aaPredicted RBP12.12□□□□□ -0.47
CD9-208ENST00000538834 ADPRHL1Q8NDY3 354 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 ELOA3Q8NG57 546 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 ADAMTS16Q8TE57 1224 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 DNAJA3Q96EY1 480 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 AMBRA1Q9C0C7 1298 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 POLR2J2Q9GZM3 115 aaKnown RBP12.12□□□□□ -0.47
CD9-208ENST00000538834 FAM107BQ9H098 131 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 POLR2J3Q9H1A7 115 aaKnown RBP12.12□□□□□ -0.47
CD9-208ENST00000538834 TMEM27Q9HBJ8 222 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 EMC3Q9P0I2 261 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 RTTNQ86VV8 2226 aa12.12□□□□□ -0.47
CD9-208ENST00000538834 TRAV36DV7A0A075B6V5 113 aa12.11□□□□□ -0.47
CD9-208ENST00000538834 MS4A18H0YCH9 400 aa12.11□□□□□ -0.47
CD9-208ENST00000538834 ZNF432O94892 652 aa12.11□□□□□ -0.47
CD9-208ENST00000538834 IGF2P01344 180 aa12.11□□□□□ -0.47
CD9-208ENST00000538834 IGHV1-2P23083 117 aa12.11□□□□□ -0.47
CD9-208ENST00000538834 PSME3P61289 254 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms