RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ETV7Q9Y603 341 aa11.18□□□□□ -0.62
CPSF7-218ENST00000537641 A0A1W2PPK0 400 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 HMSDA8MTL9 139 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 MCRIP1C9JLW8 97 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 ACOT7O00154 380 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 GALR3O60755 368 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-218ENST00000537641 NDUFB6O95139 128 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 NDUFB2O95178 105 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 HRGP04196 525 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 SRMP19623 302 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 TLX1P31314 330 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-218ENST00000537641 NUP62P37198 522 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-218ENST00000537641 RAD52P43351 418 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 PSMA6P60900 246 aaKnown RBP11.17□□□□□ -0.62
CPSF7-218ENST00000537641 PPP2CBP62714 309 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 PPP2CAP67775 309 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 HTR4Q13639 388 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 IL10RAQ13651 578 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 IRF4Q15306 451 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 TMEM255AQ5JRV8 349 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 SLC25A25Q6KCM7 469 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 RGS7BPQ6MZT1 257 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-218ENST00000537641 APOOLQ6UXV4 268 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 SYT9Q86SS6 491 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 CACUL1Q86Y37 369 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 OR51A7Q8NH64 312 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 MOSPD2Q8NHP6 518 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 SCARB1Q8WTV0 552 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 THEM6Q8WUY1 208 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 SNX33Q8WV41 574 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 COL26A1Q96A83 441 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 ZMYND19Q96E35 227 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-218ENST00000537641 DERL3Q96Q80 235 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 GFI1Q99684 422 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 SEC22CQ9BRL7 303 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 PLA2G2FQ9BZM2 168 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 CHIAQ9BZP6 476 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 NOX4Q9NPH5 578 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 MBNL1Q9NR56 388 aaKnown RBP11.17□□□□□ -0.62
CPSF7-218ENST00000537641 SPHK1Q9NYA1 384 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 MRPL15Q9P015 296 aaKnown RBP11.17□□□□□ -0.62
CPSF7-218ENST00000537641 CHRNA9Q9UGM1 479 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 KCNE5Q9UJ90 142 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 FOXJ3Q9UPW0 622 aa11.17□□□□□ -0.62
CPSF7-218ENST00000537641 SNRNP200O75643 2136 aaKnown RBP11.16□□□□□ -0.62
CPSF7-218ENST00000537641 PEX12O00623 359 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 B3GALT2O43825 422 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 RP2O75695 350 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 RGS11O94810 467 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 GYPBP06028 91 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 GUSBP08236 651 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 ADRB1P08588 477 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 SLC35G6P0C7Q6 338 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 SMIM10L1P0DMW3 83 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 PPP3CBP16298 524 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 ATF4P18848 351 aaPredicted RBP11.16□□□□□ -0.62
CPSF7-218ENST00000537641 NFYAP23511 347 aaPredicted RBP11.16□□□□□ -0.62
CPSF7-218ENST00000537641 WASP42768 502 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 MAP2K6P52564 334 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 HES5Q5TA89 166 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 TMEM81Q6P7N7 255 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 KANSL1Q7Z3B3 1105 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 KCT2Q8NC54 265 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 OR52E2Q8NGJ4 325 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 SMAP2Q8WU79 429 aaPredicted RBP11.16□□□□□ -0.62
CPSF7-218ENST00000537641 HAVCR1Q96D42 359 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 S100A16Q96FQ6 103 aaKnown RBP11.16□□□□□ -0.62
CPSF7-218ENST00000537641 SMIM10Q96HG1 83 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 KLHL15Q96M94 604 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 LINC00052Q96N35 136 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 TNFRSF13CQ96RJ3 184 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 TRIM2Q9C040 744 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 CDCP1Q9H5V8 836 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 CERS4Q9HA82 394 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 TAS2R10Q9NYW0 307 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 COQ3Q9NZJ6 369 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 NCDNQ9UBB6 729 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 ZNF69Q9UC07 566 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 SERGEFQ9UGK8 458 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 GNG8Q9UK08 70 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 ZNF281Q9Y2X9 895 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 OR1A2Q9Y585 309 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 V9GY05 133 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 LAMA3Q16787 3333 aa11.16□□□□□ -0.62
CPSF7-218ENST00000537641 NPIPA5A0A0B4J1W7 369 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 A0A1B0GWA3 101 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 A0A1W2PP55 124 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 URADA6NGE7 173 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 NPIPA7E9PJI5 369 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 PIN1P1O15428 100 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 SUSD5O60279 629 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 BRINP1O60477 761 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 PPM1BO75688 479 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 TSPAN9O75954 239 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 NMBP08949 121 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 NPIPA8P0DM63 369 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 NAT1P18440 290 aa11.15□□□□□ -0.62
CPSF7-218ENST00000537641 ZNF10P21506 573 aaPredicted RBP11.15□□□□□ -0.62
CPSF7-218ENST00000537641 MAPK3P27361 379 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms