RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 NKX3-1Q99801 234 aaPredicted RBP16.89■□□□□ 0.3
SFSWAP-203ENST00000535236 DHCR7Q9UBM7 475 aaKnown RBP16.89■□□□□ 0.3
SFSWAP-203ENST00000535236 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 H3BMQ9 156 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 NKX2-5P52952 324 aaPredicted RBP16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 TAS2R30P59541 319 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 KHSRPQ92945 711 aaKnown RBP eCLIP16.89■□□□□ 0.295e-9■■□□□ 13.4
SFSWAP-203ENST00000535236 MUL1Q969V5 352 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 KATNB1Q9BVA0 655 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 PADI1Q9ULC6 663 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 CDHR4A6H8M9 788 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 UTS2O95399 124 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 F10P00742 488 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 HOXB5P09067 269 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 SNCAP37840 140 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 PAN3Q58A45 887 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF578Q96N58 590 aaPredicted RBP16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 CTRCQ99895 268 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 RPS10P5Q9NQ39 176 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 CCL26Q9Y258 94 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 EDN1P05305 212 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 RAB6AP20340 208 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 UBE2NLQ5JXB2 153 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 STEAP3Q658P3 488 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 TMEM71Q6P5X7 295 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 BEST4Q8NFU0 473 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 OR8J2Q8NGG1 315 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 SEMA6CQ9H3T2 930 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 HRASLSQ9HDD0 168 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 ATP13A2Q9NQ11 1180 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 GLTPQ9NZD2 209 aa16.89■□□□□ 0.29
SFSWAP-203ENST00000535236 TMED7-TICAM2A0A0A6YYA0 188 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 OPRL1P41146 370 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 HOXA1P49639 335 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 NKX6-1P78426 367 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 TNK1Q13470 666 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 GGTA1PQ4G0N0 100 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 OR56B1Q8NGI3 324 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 OR6T1Q8NGN1 323 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 FBXO27Q8NI29 283 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 HSD17B8Q92506 261 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 UBL7Q96S82 380 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 GNG13Q9P2W3 67 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 MOKQ9UQ07 419 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 TMED7Q9Y3B3 224 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 TRAV36DV7A0A075B6V5 113 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 BOLA2-SMG1P6H3BVE0 249 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 H7C1C5 153 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 RFXAPO00287 272 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 LCN6P62502 163 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 OR8B8Q15620 311 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 HACD4Q5VWC8 232 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 FAM111BQ6SJ93 734 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 HHIPL1Q96JK4 782 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 C1GALT1Q9NS00 363 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 BAZ2AQ9UIF9 1905 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF814B7Z6K7 855 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 RAB40ALP0C0E4 278 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 ADRA1AP35348 466 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 MFAP5Q13361 173 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 BPIFB2Q8N4F0 458 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 RAB40AQ8WXH6 277 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 NXPE3Q969Y0 559 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 TXLNGYQ9BZA5 131 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 NKX6-3A6NJ46 265 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF705FA8MVS1 300 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF587BE7ETH6 402 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 ABHD16AO95870 558 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF705DP0CH99 300 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF705BP0CI00 300 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 PRKAR1BP31321 381 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 BRICD5Q6PL45 260 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 GLB1L2Q8IW92 636 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 SPARTQ8N0X7 666 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 SUMF2Q8NBJ7 301 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 SLC39A13Q96H72 371 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 ZNF419Q96HQ0 510 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 PRDM9Q9NQV7 894 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 LRP6O75581 1613 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 A6NHS1 94 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 TOR1AO14656 332 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 WNT11O96014 354 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 OR8G3PP0DMU2 310 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 NFYAP23511 347 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 IMPA1P29218 277 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 MLLT11Q13015 90 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 LRRC28Q86X40 367 aaPredicted RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 GTF2H4Q92759 462 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 HAS2Q92819 552 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 TSSK2Q96PF2 358 aa16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 MRPS2Q9Y399 296 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-203ENST00000535236 A6NIN4 97 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 H0YIV9 168 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 HSPB6O14558 160 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 HBMQ6B0K9 141 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 HEPHL1Q6MZM0 1159 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 DUSP13Q9UII6 198 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 MMACHCQ9Y4U1 282 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 TLCD2A6NGC4 264 aa16.87■□□□□ 0.29
SFSWAP-203ENST00000535236 EIF1BO60739 113 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms