RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SPHK1Q9NYA1 384 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 PRELID1Q9Y255 219 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 EMC9Q9Y3B6 208 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 LAMA4Q16363 1823 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 IGLV3-10A0A075B6K4 115 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 TIMM8AO60220 97 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-227ENST00000530748 SLCO2B1O94956 709 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 IFNA10P01566 189 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 ITGB2P05107 769 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 ALPLP05186 524 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 SLC5A2P31639 672 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 HTRA3P83110 453 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 SLC22A6Q4U2R8 563 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 DPY19L2P2Q6ZN68 376 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 GRAMD2AQ8IUY3 354 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 SLC38A5Q8WUX1 472 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 NICN1Q9BSH3 213 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 NGBQ9NPG2 151 aa7.88□□□□□ -1.15
CTNND1-227ENST00000530748 KRBA1A5PL33 1030 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 OR5K3A6NET4 321 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 GPR137BO60478 399 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 GMDSO60547 372 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 SEC61A1P61619 476 aaKnown RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 HTD2P86397 168 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 GPR19Q15760 415 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 PIWIL3Q7Z3Z3 882 aaKnown RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 C12orf45Q8N5I9 185 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 OR56B1Q8NGI3 324 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 MUCL1Q96DR8 90 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 FER1L6-AS2Q96M78 137 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 C1GALT1Q9NS00 363 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 PCDHGA1Q9Y5H4 931 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 CEBPZOSA8MTT3 80 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 NUDT7P0C024 238 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ZNF44P15621 663 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 RPS25P62851 125 aaKnown RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 C17orf67Q0P5P2 114 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 NXNL2Q5VZ03 156 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 OR7E24Q6IFN5 339 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 TSSK4Q6SA08 328 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 WDR88Q6ZMY6 472 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 S100A7AQ86SG5 101 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 CD163Q86VB7 1156 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 FRMD1Q8N878 549 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 CHTF18Q8WVB6 975 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 GATA6Q92908 595 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 CMSS1Q9BQ75 279 aaKnown RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 FAM117AQ9C073 453 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 NT5DC2Q9H857 520 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 PRMT8Q9NR22 394 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ASIC5Q9NY37 505 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 GLTPQ9NZD2 209 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 COL22A1Q8NFW1 1626 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 MYH11P35749 1972 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ITGB4P16144 1822 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 TLCD2A6NGC4 264 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 SURF4O15260 269 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 HCRTR1O43613 425 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ZNF780AO75290 641 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 SCG5P05408 212 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 SLC35E2P0CK97 266 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ALDH3B1P43353 468 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 PFN3P60673 137 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 TMEM176BQ3YBM2 270 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ESCO2Q56NI9 601 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 C18orf63Q68DL7 685 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 VRK3Q8IV63 474 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 PLPP6Q8IY26 295 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 LRRC56Q8IYG6 542 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 OR6T1Q8NGN1 323 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 IL1F10Q8WWZ1 152 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 KHSRPQ92945 711 aaKnown RBP eCLIP7.87□□□□□ -1.154e-7■■□□□ 12.3
CTNND1-227ENST00000530748 NEURL3Q96EH8 262 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ANKRD19PQ9H560 264 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 MED20Q9H944 212 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ATPIF1Q9UII2 106 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 FAM183AA6NL82 134 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 C17orf112F2Z3M2 114 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 FZD7O75084 574 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 CSO75390 466 aaKnown RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 OLFM2O95897 454 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 CHRM4P08173 479 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 OR2T7P0C7T2 308 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ELAVL4P26378 380 aaKnown RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 HOXA1P49639 335 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ZNF136P52737 540 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 CLDN6P56747 220 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 CARD18P57730 90 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 MSMO1Q15800 293 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 ZNF77Q15935 545 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 EXT1Q16394 746 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 FRMPD2BQ6IN97 320 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 MED25Q71SY5 747 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 PGAP1Q75T13 922 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 OR2T35Q8NGX2 323 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 OR2T27Q8NH04 317 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 GIMAP1Q8WWP7 306 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 UPRTQ96BW1 309 aa7.87□□□□□ -1.15
CTNND1-227ENST00000530748 MRPL38Q96DV4 380 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms