RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 LINC01555Q8NAE3 123 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 C20orf203Q8NBC4 194 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 OR10G3Q8NGC4 313 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 CLCC1Q96S66 551 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 TSG101Q99816 390 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 C20orf85Q9H1P6 137 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 PLGRKTQ9HBL7 147 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 POLE4Q9NR33 117 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 THUMPD1Q9NXG2 353 aaKnown RBP4.03□□□□□ -1.76
CASP4-208ENST00000530309 ADAM28Q9UKQ2 775 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 TMCO1Q9UM00 188 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 NEUROG3Q9Y4Z2 214 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 ATAD2BQ9ULI0 1458 aa4.03□□□□□ -1.76
CASP4-208ENST00000530309 PLEKHH1Q9ULM0 1364 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 ZNF646O15015 1829 aaPredicted RBP4.02□□□□□ -1.77
CASP4-208ENST00000530309 CROCCQ5TZA2 2017 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 TCRBV9S1A1TA0A576 114 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 LOC110117498-PIK3R3F6TDL0 507 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 PANO1I0J062 215 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 IL1BP01584 269 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 KLK3P07288 261 aaPredicted RBP4.02□□□□□ -1.77
CASP4-208ENST00000530309 CXCR2P25025 360 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 PRDX3P30048 256 aaKnown RBP4.02□□□□□ -1.77
CASP4-208ENST00000530309 RDXP35241 583 aaKnown RBP4.02□□□□□ -1.77
CASP4-208ENST00000530309 CEBPDP49716 269 aaPredicted RBP4.02□□□□□ -1.77
CASP4-208ENST00000530309 PRPS1P60891 318 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 DAZ2Q13117 558 aaKnown RBP4.02□□□□□ -1.77
CASP4-208ENST00000530309 OXA1LQ15070 435 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 DUSP7Q16829 419 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 MICBQ29980 383 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 TMIGD1Q6UXZ0 262 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 RNF165Q6ZSG1 346 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 PRSS41Q7RTY9 318 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 KRTAP11-1Q8IUC1 163 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 TRPV1Q8NER1 839 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 OR52H1Q8NGJ2 320 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 SCFD1Q8WVM8 642 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 RPUSD4Q96CM3 377 aaKnown RBP4.02□□□□□ -1.77
CASP4-208ENST00000530309 TIMD4Q96H15 378 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 MTMR9Q96QG7 549 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 P2RY13Q9BPV8 354 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 MRPL45Q9BRJ2 306 aaKnown RBP4.02□□□□□ -1.77
CASP4-208ENST00000530309 LRRC40Q9H9A6 602 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 DAZ3Q9NR90 486 aaKnown RBP4.02□□□□□ -1.77
CASP4-208ENST00000530309 HOXC10Q9NYD6 342 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 TRAF3IP3Q9Y228 551 aa4.02□□□□□ -1.77
CASP4-208ENST00000530309 TRIM49D1C9J1S8 452 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 NBR2O15453 112 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 NPIPB7O75200 414 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 SURF6O75683 361 aaKnown RBP4.01□□□□□ -1.77
CASP4-208ENST00000530309 OXSR1O95747 527 aaPredicted RBP4.01□□□□□ -1.77
CASP4-208ENST00000530309 IL12AP29459 219 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 MAGEA8P43361 318 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 GPM6AP51674 278 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 ATP1B3P54709 279 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 TAS2R19P59542 299 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 CKAP4Q07065 602 aaKnown RBP4.01□□□□□ -1.77
CASP4-208ENST00000530309 PAGE3Q5JUK9 113 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 PNKDQ8N490 385 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 EIF1ADQ8N9N8 165 aaKnown RBP4.01□□□□□ -1.77
CASP4-208ENST00000530309 MAGEE2Q8TD90 523 aaPredicted RBP4.01□□□□□ -1.77
CASP4-208ENST00000530309 RNF138Q8WVD3 245 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 UFD1Q92890 307 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 CXorf40BQ96DE9 158 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 CMTM7Q96FZ5 175 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 COPS8Q99627 209 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 MCCC2Q9HCC0 563 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 BFARQ9NZS9 450 aa4.01□□□□□ -1.77
CASP4-208ENST00000530309 ATP10AO60312 1499 aa4□□□□□ -1.77
CASP4-208ENST00000530309 E9PBE3 544 aa4□□□□□ -1.77
CASP4-208ENST00000530309 CCNE1P24864 410 aa4□□□□□ -1.77
CASP4-208ENST00000530309 CTRLP40313 264 aa4□□□□□ -1.77
CASP4-208ENST00000530309 GLP1RP43220 463 aa4□□□□□ -1.77
CASP4-208ENST00000530309 DLX1P56177 255 aa4□□□□□ -1.77
CASP4-208ENST00000530309 FILIP1LQ4L180 1135 aa4□□□□□ -1.77
CASP4-208ENST00000530309 MARCH8Q5T0T0 291 aa4□□□□□ -1.77
CASP4-208ENST00000530309 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
CASP4-208ENST00000530309 Q6ZN92 141 aa4□□□□□ -1.77
CASP4-208ENST00000530309 RFLNAQ6ZTI6 216 aa4□□□□□ -1.77
CASP4-208ENST00000530309 EFL1Q7Z2Z2 1120 aaKnown RBP4□□□□□ -1.77
CASP4-208ENST00000530309 SLC26A11Q86WA9 606 aa4□□□□□ -1.77
CASP4-208ENST00000530309 TRIM69Q86WT6 500 aa4□□□□□ -1.77
CASP4-208ENST00000530309 RNF175Q8N4F7 328 aa4□□□□□ -1.77
CASP4-208ENST00000530309 SUMF2Q8NBJ7 301 aa4□□□□□ -1.77
CASP4-208ENST00000530309 BHLHE23Q8NDY6 225 aa4□□□□□ -1.77
CASP4-208ENST00000530309 FAM151AQ8WW52 585 aa4□□□□□ -1.77
CASP4-208ENST00000530309 C10orf35Q96D05 121 aa4□□□□□ -1.77
CASP4-208ENST00000530309 OXGR1Q96P68 337 aa4□□□□□ -1.77
CASP4-208ENST00000530309 KCNA7Q96RP8 456 aa4□□□□□ -1.77
CASP4-208ENST00000530309 NRIP2Q9BQI9 281 aa4□□□□□ -1.77
CASP4-208ENST00000530309 SLC39A3Q9BRY0 314 aa4□□□□□ -1.77
CASP4-208ENST00000530309 NAT9Q9BTE0 207 aa4□□□□□ -1.77
CASP4-208ENST00000530309 MMP26Q9NRE1 261 aa4□□□□□ -1.77
CASP4-208ENST00000530309 MTRF1LQ9UGC7 380 aaKnown RBP4□□□□□ -1.77
CASP4-208ENST00000530309 NSG1A0A0A6YYJ2 146 aa3.99□□□□□ -1.77
CASP4-208ENST00000530309 PINLYPA6NC86 204 aa3.99□□□□□ -1.77
CASP4-208ENST00000530309 CXCL11O14625 94 aa3.99□□□□□ -1.77
CASP4-208ENST00000530309 HSD17B6O14756 317 aa3.99□□□□□ -1.77
CASP4-208ENST00000530309 AGPAT2O15120 278 aa3.99□□□□□ -1.77
CASP4-208ENST00000530309 RIPK2O43353 540 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms