RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 KAT8Q9H7Z6 458 aaKnown RBP29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 RNF115Q9Y4L5 304 aa29.15■■■□□ 2.26
SSSCA1-205ENST00000527920 HS3ST1O14792 307 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 TPST1O60507 370 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 IGHV3-9P01782 118 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 P2RY4P51582 365 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 PPA1Q15181 289 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 CYP51A1Q16850 503 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 HSP90B2PQ58FF3 399 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 SHEQ5VZ18 495 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 FAM91A1Q658Y4 838 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 ARMC8Q8IUR7 673 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 SLC30A8Q8IWU4 369 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 ZNF611Q8N823 705 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 IGFBPL1Q8WX77 278 aa29.14■■■□□ 2.26
SSSCA1-205ENST00000527920 A0A1B0GWA3 101 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 ELOA3DA6NLF2 546 aaPredicted RBP29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 FTCDNL1E5RQL4 147 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 PDLIM1O00151 329 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 SMPD2O60906 423 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 MFN2O95140 757 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 PNMTP11086 282 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 HTR2AP28223 471 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 AQP1P29972 269 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 MTPNP58546 118 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 EGR4Q05215 589 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 CAPRIN1Q14444 709 aaKnown RBP29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 STK11Q15831 433 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 ELOA3BQ3SY89 546 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 GLIPR1L2Q4G1C9 344 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 COQ5Q5HYK3 327 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 ALKBH2Q6NS38 261 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 LSRQ86X29 649 aaPredicted RBP29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 ZIC4Q8N9L1 334 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 ELOA3Q8NG57 546 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 PTDSS2Q9BVG9 487 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 MED4Q9NPJ6 270 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 ADPRHL2Q9NX46 363 aa29.13■■■□□ 2.25
SSSCA1-205ENST00000527920 PLAUP00749 431 aa29.12■■■□□ 2.25
SSSCA1-205ENST00000527920 ARFIP2P53365 341 aa29.12■■■□□ 2.25
SSSCA1-205ENST00000527920 FOXD4Q12950 439 aaPredicted RBP29.12■■■□□ 2.25
SSSCA1-205ENST00000527920 TRMT5Q32P41 509 aaKnown RBP29.12■■■□□ 2.25
SSSCA1-205ENST00000527920 OR7E24Q6IFN5 339 aa29.12■■■□□ 2.25
SSSCA1-205ENST00000527920 KRTAP1-3Q8IUG1 177 aa29.12■■■□□ 2.25
SSSCA1-205ENST00000527920 OR52E4Q8NGH9 312 aa29.12■■■□□ 2.25
SSSCA1-205ENST00000527920 AMBRA1Q9C0C7 1298 aa29.12■■■□□ 2.25
SSSCA1-205ENST00000527920 SLC13A4Q9UKG4 626 aa29.12■■■□□ 2.25
SSSCA1-205ENST00000527920 RASD1Q9Y272 281 aa29.12■■■□□ 2.25
SSSCA1-205ENST00000527920 ARHGEF9O43307 516 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 CD3EP07766 207 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 RGS8P57771 180 aaPredicted RBP29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 NCALDP61601 193 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 NKX6-1P78426 367 aaPredicted RBP29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 DMTNQ08495 405 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 SELPLGQ14242 412 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 C1QTNF12Q5T7M4 302 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 TMEM225Q6GV28 225 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 CGB2Q6NT52 195 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 ULK3Q6PHR2 472 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 C1orf162Q8NEQ5 155 aaPredicted RBP29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 DLL4Q9NR61 685 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 ACANP16112 2415 aa29.11■■■□□ 2.25
SSSCA1-205ENST00000527920 ARID1AO14497 2285 aa29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 CIB4A0PJX0 185 aa29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 FBP2O00757 339 aa29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 OR2T1O43869 369 aa29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 VIMP08670 466 aaKnown RBP29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 FAPQ12884 760 aa29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 ALG10BQ5I7T1 473 aa29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 POMGNT2Q8NAT1 580 aa29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 MUS81Q96NY9 551 aa29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 ZNF385AQ96PM9 386 aaKnown RBP29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 SLC7A10Q9NS82 523 aa29.1■■■□□ 2.25
SSSCA1-205ENST00000527920 FLNAP21333 2647 aaKnown RBP29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 CCT8L1PA6NM43 557 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 BBIP1A8MTZ0 92 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 RAD51DO75771 328 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 NPPAP01160 153 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 C8BP07358 591 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 ITGA5P08648 1049 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 FOSL1P15407 271 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 PCGF2P35227 344 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 CYLC2Q14093 348 aaPredicted RBP29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 SWT1Q5T5J6 900 aaKnown RBP29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 TSPO2Q5TGU0 170 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 GPAT4Q86UL3 456 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 C17orf78Q8N4C9 275 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 WFDC11Q8NEX6 87 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 AKAP1Q92667 903 aaKnown RBP eCLIP29.09■■■□□ 2.254e-7■■■□□ 17
SSSCA1-205ENST00000527920 SLC38A4Q969I6 547 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 KTI12Q96EK9 354 aaPredicted RBP29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 SLC47A1Q96FL8 570 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 TMEM27Q9HBJ8 222 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 SAR1AQ9NR31 198 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 UPB1Q9UBR1 384 aa29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 ZNF469Q96JG9 3925 aaPredicted RBP29.09■■■□□ 2.25
SSSCA1-205ENST00000527920 DSCAMO60469 2012 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 FMO6PO60774 539 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 PAX1P15863 534 aa29.08■■■□□ 2.25
SSSCA1-205ENST00000527920 BSPH1Q075Z2 132 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 278.6 ms