RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 NOP53Q9NZM5 478 aaKnown RBP19.73■□□□□ 0.75
PVT1-218ENST00000523328 ARPC4-TTLL3A0A0A6YYG9 625 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 LIPT2A6NK58 231 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 AQP7P3A6NL99 342 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 FAAHO00519 579 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 LGI1O95970 557 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 IGLV1-44P01699 117 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 GPIP06744 558 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 DAOP14920 347 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 PAX7P23759 505 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 SERPINB5P36952 375 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 SRP14P37108 136 aaKnown RBP19.72■□□□□ 0.75
PVT1-218ENST00000523328 KHKP50053 298 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 CEACAM7Q14002 265 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 C3orf36Q3SXR2 165 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 GPAT3Q53EU6 434 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 LINGO2Q7L985 606 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 CMIPQ8IY22 773 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 LINC01356Q8N9X3 169 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 NEURL3Q96EH8 262 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 ALKBH3Q96Q83 286 aaPredicted RBP19.72■□□□□ 0.75
PVT1-218ENST00000523328 ADAM19Q9H013 955 aa19.72■□□□□ 0.75
PVT1-218ENST00000523328 PRSS51A0A1B0GVH4 220 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 AGAP5A6NIR3 686 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 HMGN4O00479 90 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 NR5A2O00482 541 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 CPSF4O95639 269 aaKnown RBP19.71■□□□□ 0.75
PVT1-218ENST00000523328 C1QCP02747 245 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 APEX1P27695 318 aaKnown RBP19.71■□□□□ 0.75
PVT1-218ENST00000523328 P2RY4P51582 365 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 CDH15P55291 814 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 TUBA1BP68363 451 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 TUBA4AP68366 448 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 HPCAP84074 193 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 OR7A5Q15622 319 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 C12orf54Q6X4T0 127 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 TUBA1AQ71U36 451 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 GPAT4Q86UL3 456 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 ZCCHC24Q8N2G6 241 aaKnown RBP19.71■□□□□ 0.75
PVT1-218ENST00000523328 NUP37Q8NFH4 326 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 OR4F15Q8NGB8 312 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 SLC38A1Q9H2H9 487 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 NELFAQ9H3P2 528 aa19.71■□□□□ 0.75
PVT1-218ENST00000523328 FBXO9Q9UK97 447 aaPredicted RBP19.71■□□□□ 0.75
PVT1-218ENST00000523328 ZNF587BE7ETH6 402 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 KRT33AO76009 404 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 IGFBP1P08833 259 aaPredicted RBP19.7■□□□□ 0.74
PVT1-218ENST00000523328 SELENOPP49908 381 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 UBE2NP61088 152 aaKnown RBP19.7■□□□□ 0.74
PVT1-218ENST00000523328 HGFACQ04756 655 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 EPS8Q12929 822 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 SYPL1Q16563 259 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 SMU1Q2TAY7 513 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 ZNF786Q8N393 782 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 ANKFN1Q8N957 763 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 MAGEE2Q8TD90 523 aaPredicted RBP19.7■□□□□ 0.74
PVT1-218ENST00000523328 NEU4Q8WWR8 484 aaPredicted RBP19.7■□□□□ 0.74
PVT1-218ENST00000523328 ZNF317Q96PQ6 595 aaPredicted RBP19.7■□□□□ 0.74
PVT1-218ENST00000523328 SNX18Q96RF0 628 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 DOK1Q99704 481 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 ZNF442Q9H7R0 627 aa19.7■□□□□ 0.74
PVT1-218ENST00000523328 MARCOQ9UEW3 520 aaPredicted RBP19.7■□□□□ 0.74
PVT1-218ENST00000523328 TMEM129A0AVI4 362 aa19.69■□□□□ 0.74
PVT1-218ENST00000523328 hCG_2039718K7EN88 272 aa19.69■□□□□ 0.74
PVT1-218ENST00000523328 SNUPNO95149 360 aaKnown RBP19.69■□□□□ 0.74
PVT1-218ENST00000523328 IGKV3-15P01624 115 aa19.69■□□□□ 0.74
PVT1-218ENST00000523328 CHRM4P08173 479 aa19.69■□□□□ 0.74
PVT1-218ENST00000523328 RPS4Y1P22090 263 aaKnown RBP19.69■□□□□ 0.74
PVT1-218ENST00000523328 RIN1Q13671 783 aa19.69■□□□□ 0.74
PVT1-218ENST00000523328 CASP8Q14790 479 aa19.69■□□□□ 0.74
PVT1-218ENST00000523328 TRIP10Q15642 601 aa19.69■□□□□ 0.74
PVT1-218ENST00000523328 CREB3L2Q70SY1 520 aa19.69■□□□□ 0.74
PVT1-218ENST00000523328 MYPOPQ86VE0 399 aaPredicted RBP19.69■□□□□ 0.74
PVT1-218ENST00000523328 FAM169BQ8N8A8 192 aa19.69■□□□□ 0.74
PVT1-218ENST00000523328 TRNT1Q96Q11 434 aaKnown RBP19.69■□□□□ 0.74
PVT1-218ENST00000523328 SLC35A5Q9BS91 424 aa19.69■□□□□ 0.74
PVT1-218ENST00000523328 A0A096LPE4 126 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 A0A1W2PPZ6 126 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 CFAP73A6NFT4 308 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 UPK3AO75631 287 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 VENTXO95231 258 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 THBS4P35443 961 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 MRPL2Q5T653 305 aaKnown RBP19.68■□□□□ 0.74
PVT1-218ENST00000523328 ANXA8L1Q5VT79 327 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 TMEM225Q6GV28 225 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 SVOPLQ8N434 492 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 TCP10LQ8TDR4 215 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 WDR60Q8WVS4 1066 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 TESCQ96BS2 214 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 DPY30Q9C005 99 aa19.68■□□□□ 0.74
PVT1-218ENST00000523328 SPRY1O43609 319 aaPredicted RBP19.67■□□□□ 0.74
PVT1-218ENST00000523328 SPAG7O75391 227 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 CELA3BP08861 270 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 NPR2P20594 1047 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 CXCR1P25024 350 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 CHI3L1P36222 383 aaPredicted RBP19.67■□□□□ 0.74
PVT1-218ENST00000523328 DVL1P1P54792 670 aaPredicted RBP19.67■□□□□ 0.74
PVT1-218ENST00000523328 GSTA3Q16772 222 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 LRRC74BQ6ZQY2 392 aa19.67■□□□□ 0.74
PVT1-218ENST00000523328 RINLQ6ZS11 566 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms