RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ZAR1LA6NP61 321 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 FAM166BA8MTA8 275 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 BCKDKO14874 412 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 RCBTB2O95199 551 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 CH25HO95992 272 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 PDGFAP04085 211 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 CCNA2P20248 432 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 CHMP24386 653 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 IDUAP35475 653 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 MAGEA5P43359 124 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 CRISP1P54107 249 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 GFRA1P56159 465 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 RPS4XP62701 263 aaKnown RBP11.77□□□□□ -0.53
CPNE3-205ENST00000522240 PPIAP62937 165 aaKnown RBP11.77□□□□□ -0.53
CPNE3-205ENST00000522240 RAC1P63000 192 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 IL18R1Q13478 541 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 TOMM20Q15388 145 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 TAF11Q15544 211 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 ZBED5Q49AG3 693 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 C4orf48Q5BLP8 95 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 C6orf52Q5T4I8 152 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 RPUSD3Q6P087 351 aaKnown RBP11.77□□□□□ -0.53
CPNE3-205ENST00000522240 OAFQ86UD1 273 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 KIF18BQ86Y91 864 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 CHERPQ8IWX8 916 aaKnown RBP11.77□□□□□ -0.53
CPNE3-205ENST00000522240 RBMXL3Q8N7X1 1067 aaKnown RBP11.77□□□□□ -0.53
CPNE3-205ENST00000522240 OR13C2Q8NGS9 318 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 MFSD8Q8NHS3 518 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 TEX47Q8TBZ9 253 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 CYGBQ8WWM9 190 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 TAAR8Q969N4 342 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 ABHD17AQ96GS6 310 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 HRASLS5Q96KN8 279 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 SFXN2Q96NB2 322 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 OR11A1Q9GZK7 315 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 NDEL1Q9GZM8 345 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 SLC25A19Q9HC21 320 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 NANSQ9NR45 359 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 IL20Q9NYY1 176 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 NDRG4Q9ULP0 352 aaKnown RBP11.77□□□□□ -0.53
CPNE3-205ENST00000522240 HIF3AQ9Y2N7 669 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 CORINQ9Y5Q5 1042 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 NCKAP5O14513 1909 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 MPDZO75970 2070 aa11.77□□□□□ -0.53
CPNE3-205ENST00000522240 MGAQ8IWI9 3026 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 LOC100130705A0A1B0GUX0 176 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 FTCDNL1E5RQL4 147 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 H3BML4 177 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 H3BN98 237 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 DENRO43583 198 aaKnown RBP11.76□□□□□ -0.53
CPNE3-205ENST00000522240 EFNA2O43921 213 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 TRAPPC6AO75865 159 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 SOX14O95416 240 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 TSPAN19P0C672 248 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 ASAH2BP0C7U1 165 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 TFPIP10646 304 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 ZNF24P17028 368 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 FUT1P19526 365 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 IL11P20809 199 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 TCEA1P23193 301 aaKnown RBP11.76□□□□□ -0.53
CPNE3-205ENST00000522240 RFC3P40938 356 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 RPS5P46782 204 aaKnown RBP11.76□□□□□ -0.53
CPNE3-205ENST00000522240 NUP107P57740 925 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 PRPS1P60891 318 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 C19orf57Q0VDD7 668 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 OXLD1Q5BKU9 147 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 WIPI1Q5MNZ9 446 aaPredicted RBP11.76□□□□□ -0.53
CPNE3-205ENST00000522240 USP51Q70EK9 711 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 MAMDC2Q7Z304 686 aaPredicted RBP11.76□□□□□ -0.53
CPNE3-205ENST00000522240 NANOGNBQ7Z5D8 188 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 YRDCQ86U90 279 aaKnown RBP11.76□□□□□ -0.53
CPNE3-205ENST00000522240 MEX3DQ86XN8 651 aaKnown RBP11.76□□□□□ -0.53
CPNE3-205ENST00000522240 SCAIQ8N9R8 606 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 ADPRHL1Q8NDY3 354 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 OR52L1Q8NGH7 329 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 OR5M1Q8NGP8 315 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 C9orf43Q8TAL5 461 aaPredicted RBP11.76□□□□□ -0.53
CPNE3-205ENST00000522240 OSTF1Q92882 214 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 KLHL15Q96M94 604 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 MOGAT1Q96PD6 335 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 GPX7Q96SL4 187 aaPredicted RBP11.76□□□□□ -0.53
CPNE3-205ENST00000522240 OR52D1Q9H346 318 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 TBC1D23Q9NUY8 699 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 ALKBH4Q9NXW9 302 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 B3GNT3Q9Y2A9 372 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 TP53TG5Q9Y2B4 290 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 LRCH1Q9Y2L9 728 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 CNTRLQ7Z7A1 2325 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 SPTA1P02549 2419 aa11.76□□□□□ -0.53
CPNE3-205ENST00000522240 LIPT2A6NK58 231 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 LRRN3E7EW58 273 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 TFECO14948 347 aaPredicted RBP11.75□□□□□ -0.53
CPNE3-205ENST00000522240 DNPH1O43598 174 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 NDUFB2O95178 105 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 PMS2P2O95744 297 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 PEPDP12955 493 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 BMP7P18075 431 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 MYF6P23409 242 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 GTF2E2P29084 291 aaKnown RBP11.75□□□□□ -0.53
CPNE3-205ENST00000522240 UQCRC1P31930 480 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms