RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ZNF443Q9Y2A4 671 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 AHCTF1Q8WYP5 2266 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 MYO16Q9Y6X6 1858 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 POM121BA6NF01 834 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC16A7O60669 478 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 FZD7O75084 574 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 PNMTP11086 282 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 CTHP32929 405 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 RNASE10Q5GAN6 216 aaKnown RBP10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 TMEM240Q5SV17 173 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 KIAA1211LQ6NV74 962 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 UEVLDQ8IX04 471 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 TDHQ8IZJ6 230 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 ELMOD3Q96FG2 381 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 CPNE2Q96FN4 548 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 C19orf43Q9BQ61 176 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 SPNS1Q9H2V7 528 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 MIXL1Q9H2W2 232 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 POT1Q9NUX5 634 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 PTRH2Q9Y3E5 179 aaKnown RBP10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 A0A0A6YYJ9 748 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 TEX51A0A1B0GUA7 166 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 RP2O75695 350 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 SCO1O75880 301 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 TFP02787 698 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 TCRBP04435 133 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 ALDOBP05062 364 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF806P0C7X5 589 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 GABRB1P18505 474 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 PTBP1P26599 531 aaKnown RBP eCLIP10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 HSD11B2P80365 405 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 NKPD1Q17RQ9 610 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 FAM209AQ5JX71 171 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 TRMT61AQ96FX7 289 aaKnown RBP10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 BMFQ96LC9 184 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 B4GALT7Q9UBV7 327 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC7A11Q9UPY5 501 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 SPTBN2O15020 2390 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 A6NLC8 198 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 CCR2P41597 374 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 MTNR1BP49286 362 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 BTG1P62324 171 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 GALEQ14376 348 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 DUSP6Q16828 381 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 EIF5AL1Q6IS14 154 aaKnown RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 SFXN4Q6P4A7 337 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 BAIAP2L2Q6UXY1 529 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 TMPPEQ6ZT21 453 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ADIPOR2Q86V24 386 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 LAS2Q8IYD9 372 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ELP5Q8TE02 316 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ASB12Q8WXK4 309 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 KLHL15Q96M94 604 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 AMDHD1Q96NU7 426 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 DCLRE1CQ96SD1 692 aaKnown RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ATF6BQ99941 703 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ARL6Q9H0F7 186 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF576Q9H609 170 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 EMC7Q9NPA0 242 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC23A1Q9UHI7 598 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 IGLV3-16A0A075B6K0 115 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 F5H0A9 414 aaPredicted RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR2T1O43869 369 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 TMEM225BP0DP42 221 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 RAB11BQ15907 218 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 LYPD8Q6UX82 237 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 LRRC56Q8IYG6 542 aaPredicted RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 MFSD9Q8NBP5 474 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR13H1Q8NG92 308 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 GPR32P1Q8NGA4 272 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR51Q1Q8NH59 317 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF775Q96BV0 537 aaPredicted RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 BORCS8Q96FH0 119 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 MAP3K3Q99759 626 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC5A7Q9GZV3 580 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC25A19Q9HC21 320 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 UBQLN4Q9NRR5 601 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 RNF215Q9Y6U7 377 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 A0A087WUU8 490 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 SYT7O43581 403 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 AKR1C4P17516 323 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 CCR6P51684 374 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 TOR2AQ5JU69 321 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 FAM198BQ6UWH4 519 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ADAMTSL4Q6UY14 1074 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 BEND4Q6ZU67 534 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ANGPTL6Q8NI99 470 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 PATE1Q8WXA2 126 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ALG14Q96F25 216 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ARHGAP9Q9BRR9 750 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 NAA11Q9BSU3 229 aaPredicted RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 SYT4Q9H2B2 425 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 METTL17Q9H7H0 456 aaPredicted RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ATP13A2Q9NQ11 1180 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 KLHL9Q9P2J3 617 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 TBX21Q9UL17 535 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 MEIS3P1A6NDR6 274 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 RAD51DO75771 328 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 LGI1O95970 557 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 AMY2AP04746 511 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms