RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 OMPP47874 163 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 OR2B6P58173 313 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 OR7A5Q15622 319 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 EMC4Q5J8M3 183 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 CHMP1BQ7LBR1 199 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 HIPK1Q86Z02 1210 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 C10orf53Q8N6V4 93 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 OR5M9Q8NGP3 310 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 OR5K1Q8NHB7 308 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 GIPC3Q8TF64 312 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 RELTQ969Z4 430 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 ZHX1-C8orf76Q96EF9 292 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 MOGAT1Q96PD6 335 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 TUBA1CQ9BQE3 449 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 SEMA6AQ9H2E6 1030 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 STX18Q9P2W9 335 aaKnown RBP18.81■□□□□ 0.6
LSM6-207ENST00000515311 ZNF229Q9UJW7 825 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 CORINQ9Y5Q5 1042 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 G3V2T6 193 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 MGRN1O60291 552 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 OR7A10O76100 309 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 BAG2O95816 211 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 CH25HO95992 272 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 AGFG1P52594 562 aaKnown RBP18.8■□□□□ 0.6
LSM6-207ENST00000515311 H3F3AP84243 136 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 TLE1Q04724 770 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 LTBQ06643 244 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 RIPK1Q13546 671 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 LAPTM4AQ15012 233 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 SGCBQ16585 318 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 ZNF239Q16600 458 aaKnown RBP18.8■□□□□ 0.6
LSM6-207ENST00000515311 C1orf94Q6P1W5 598 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 PGBD2Q6P3X8 592 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 PAQR6Q6TCH4 344 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 MAMDC2Q7Z304 686 aaPredicted RBP18.8■□□□□ 0.6
LSM6-207ENST00000515311 PRICKLE2Q7Z3G6 844 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 SLC46A3Q7Z3Q1 461 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 ADGRE4PQ86SQ3 457 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 CD163Q86VB7 1156 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 ZDHHC13Q8IUH4 622 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 SCAIQ8N9R8 606 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 OR10G2Q8NGC3 310 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 DNAJA3Q96EY1 480 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 UCN2Q96RP3 112 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 SRXN1Q9BYN0 137 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 NANSQ9NR45 359 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 PDP1Q9P0J1 537 aaPredicted RBP18.8■□□□□ 0.6
LSM6-207ENST00000515311 ZNF175Q9Y473 711 aa18.8■□□□□ 0.6
LSM6-207ENST00000515311 EIF4E1BA6NMX2 242 aaKnown RBP18.79■□□□□ 0.6
LSM6-207ENST00000515311 CLCA1A8K7I4 914 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 KLF4O43474 513 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 ASAH2BP0C7U1 165 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 ZNF23P17027 643 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 MAKP20794 623 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 FPR3P25089 353 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 GTF2E2P29084 291 aaKnown RBP18.79■□□□□ 0.6
LSM6-207ENST00000515311 NUP107P57740 925 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 ACSF3Q4G176 576 aaPredicted RBP18.79■□□□□ 0.6
LSM6-207ENST00000515311 ZER1Q7Z7L7 766 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 AQP11Q8NBQ7 271 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 GALNT11Q8NCW6 608 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 ADPRHL1Q8NDY3 354 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 OR9Q2Q8NGE9 314 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 SLC25A36Q96CQ1 311 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 FAM46AQ96IP4 442 aaKnown RBP18.79■□□□□ 0.6
LSM6-207ENST00000515311 ZNF845Q96IR2 970 aaPredicted RBP18.79■□□□□ 0.6
LSM6-207ENST00000515311 ASPNQ9BXN1 380 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 TP63Q9H3D4 680 aaPredicted RBP18.79■□□□□ 0.6
LSM6-207ENST00000515311 MRPL39Q9NYK5 338 aaKnown RBP18.79■□□□□ 0.6
LSM6-207ENST00000515311 MCTS1Q9ULC4 181 aaKnown RBP18.79■□□□□ 0.6
LSM6-207ENST00000515311 OAZ3Q9UMX2 235 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 MGAT4BQ9UQ53 548 aa18.79■□□□□ 0.6
LSM6-207ENST00000515311 EFCAB9A8MZ26 197 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 LRRN3E7EW58 273 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 SYNGR4O95473 234 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 SAGP10523 405 aaPredicted RBP18.78■□□□□ 0.6
LSM6-207ENST00000515311 FUT1P19526 365 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 ENPP1P22413 925 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 CBLP22681 906 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 ACVR2AP27037 513 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 GRPRP30550 384 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 GPR4P46093 362 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 SLC9A3P48764 834 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 ANKDD1AQ495B1 522 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 ZNF585AQ6P3V2 769 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 GNPDA2Q8TDQ7 276 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 SDCCAG3Q96C92 435 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 FEVQ99581 238 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 NAA11Q9BSU3 229 aaPredicted RBP18.78■□□□□ 0.6
LSM6-207ENST00000515311 OSBPL10Q9BXB5 764 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 DGCR6LQ9BY27 220 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 GABARAPL1Q9H0R8 117 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 CALHM2Q9HA72 323 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 RNPEPL1Q9HAU8 725 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 CLCF1Q9UBD9 225 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 B3GALT5Q9Y2C3 310 aa18.78■□□□□ 0.6
LSM6-207ENST00000515311 SMG1Q96Q15 3661 aaKnown RBP18.78■□□□□ 0.6
LSM6-207ENST00000515311 RP1L1Q8IWN7 2480 aaPredicted RBP18.77■□□□□ 0.6
LSM6-207ENST00000515311 CD8B2A6NJW9 211 aa18.77■□□□□ 0.6
LSM6-207ENST00000515311 SLC22A20A6NK97 555 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms