RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ADORA2A-AS1P86434 159 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 SPIBQ01892 262 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 ZNF117Q03924 483 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 SRYQ05066 204 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 FGFBP1Q14512 234 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 ZSWIM7Q19AV6 140 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 EXOC3L2Q2M3D2 409 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 TMEM44Q2T9K0 475 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 ZBED5Q49AG3 693 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 CBLN3Q6UW01 205 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 CCDC71Q8IV32 467 aaPredicted RBP7.5□□□□□ -1.21
CCL28-204ENST00000514421 CMIPQ8IY22 773 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 PEX5LQ8IYB4 626 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 GTPBP8Q8N3Z3 284 aaPredicted RBP7.5□□□□□ -1.21
CCL28-204ENST00000514421 MEIOBQ8N635 442 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 ATG16L2Q8NAA4 619 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 OR10G2Q8NGC3 310 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 OR4D11Q8NGI4 311 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 OR5M1Q8NGP8 315 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 OR52P1PQ8NH57 321 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 OR5W2Q8NH69 310 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 GPR119Q8TDV5 335 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 ASB5Q8WWX0 329 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 MYCBPQ99417 103 aaPredicted RBP7.5□□□□□ -1.21
CCL28-204ENST00000514421 DOK1Q99704 481 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 APOL4Q9BPW4 351 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 POLR2J2Q9GZM3 115 aaKnown RBP7.5□□□□□ -1.21
CCL28-204ENST00000514421 POLR2J3Q9H1A7 115 aaKnown RBP7.5□□□□□ -1.21
CCL28-204ENST00000514421 PAPOLBQ9NRJ5 636 aaKnown RBP7.5□□□□□ -1.21
CCL28-204ENST00000514421 PLCXD1Q9NUJ7 323 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 COQ3Q9NZJ6 369 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 BLOC1S6Q9UL45 172 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 MGAT4BQ9UQ53 548 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 VDAC3Q9Y277 283 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 SLC9A8Q9Y2E8 581 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 IFT52Q9Y366 437 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 CHST2Q9Y4C5 530 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 CEPT1Q9Y6K0 416 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 PTPN13Q12923 2485 aa7.5□□□□□ -1.21
CCL28-204ENST00000514421 PCNX3Q9H6A9 2034 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 CENPVL1A0A0U1RR11 272 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 SH3PXD2BA1X283 911 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 CD8B2A6NJW9 211 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 ZAR1LA6NP61 321 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 J3KTA2 159 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 CCNB2O95067 398 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 H1F0P07305 194 aaKnown RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 HTR1AP08908 422 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 RNF224P0DH78 156 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 ATP6V1B1P15313 513 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 ZNF708P17019 499 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 ZNF17P17021 662 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 GABRB1P18505 474 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 PGCP20142 388 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 POU3F2P20265 443 aaPredicted RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 EPHA2P29317 976 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 TIMP3P35625 211 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 RNF144AP50876 292 aaPredicted RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 CDH15P55291 814 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 CLDN18P56856 261 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 RPS3AP61247 264 aaKnown RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 RAC1P63000 192 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 SLC35A2P78381 396 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 COX10Q12887 443 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 CBFBQ13951 182 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 LAPTM4AQ15012 233 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 MAD2L1BPQ15013 274 aaPredicted RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 LARS2Q15031 903 aaKnown RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 NPTX1Q15818 432 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 PLPPR5Q32ZL2 321 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 CNPY1Q3B7I2 92 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 SLC25A53Q5H9E4 307 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 DCST1Q5T197 706 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 RIPPLY2Q5TAB7 128 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 NSUN5P2Q63ZY6 315 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 GTF2IRD2BQ6EKJ0 949 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 XAF1Q6GPH4 301 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 NCCRP1Q6ZVX7 275 aaPredicted RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 CHMP1BQ7LBR1 199 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 GALNT5Q7Z7M9 940 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 GTF2IRD2Q86UP8 949 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 LACC1Q8IV20 430 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 RPRMLQ8N4K4 120 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 LILRB4Q8NHJ6 448 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 RHOXF1Q8NHV9 184 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 ZNF420Q8TAQ5 688 aaPredicted RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 POC1BQ8TC44 478 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 ITLN2Q8WWU7 325 aaPredicted RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 TMEM234Q8WY98 164 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 PRRC1Q96M27 445 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 ALPK1Q96QP1 1244 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 UCN2Q96RP3 112 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 TRIB1Q96RU8 372 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 NIPSNAP1Q9BPW8 284 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 WFDC6Q9BQY6 131 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 QRSL1Q9H0R6 528 aaKnown RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 ARMC7Q9H6L4 198 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 CACYBPQ9HB71 228 aaKnown RBP7.49□□□□□ -1.21
CCL28-204ENST00000514421 EXOSC3Q9NQT5 275 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms