RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ARMCX4Q5H9R4 360 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 PDZK1Q5T2W1 519 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 DCAF12L2Q5VW00 463 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 CRIP3Q6Q6R5 217 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 LRIG3Q6UXM1 1119 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 USP43Q70EL4 1123 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 LINGO2Q7L985 606 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 LRP11Q86VZ4 500 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 SLC43A2Q8N370 569 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ZNF786Q8N393 782 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 MMGT1Q8N4V1 131 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 KIR3DL3Q8N743 410 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ZNF540Q8NDQ6 660 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 OR5D16Q8NGK9 328 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 OR5AK3PQ8NH89 298 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 FAM110DQ8TAY7 271 aaPredicted RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 ZNF483Q8TF39 744 aaPredicted RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 LRRC39Q96DD0 335 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ELP4Q96EB1 424 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 GIMAP5Q96F15 307 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 EGLN2Q96KS0 407 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 C8orf49Q96NF6 230 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 GPR78Q96P69 363 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ZNF385AQ96PM9 386 aaKnown RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 TSSK3Q96PN8 268 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 TMEM237Q96Q45 408 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 TSPAN32Q96QS1 320 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 JMJD8Q96S16 334 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 MRPL37Q9BZE1 423 aaKnown RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 SHCBP1LQ9BZQ2 653 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ZNF665Q9H7R5 613 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 NOX3Q9HBY0 568 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 G6PC2Q9NQR9 355 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 CTPS2Q9NRF8 586 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ZCCHC3Q9NUD5 404 aaKnown RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 MED29Q9NX70 200 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 UBAP1Q9NZ09 502 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 VPS29Q9UBQ0 182 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ZNF69Q9UC07 566 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 MRTO4Q9UKD2 239 aaKnown RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 SNX6Q9UNH7 406 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 FIS1Q9Y3D6 152 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 PCDHB14Q9Y5E9 798 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 CACNG2Q9Y698 323 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 TRAV20A0A0B4J274 112 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 TRAV40A0A0B4J280 105 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 IGHV2OR16-5A0A0B4J2B6 119 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 A0A0G2JMP0 313 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 A0A0X1KG70 313 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 LOC100653049A0A140TA62 436 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 A0A1W2PPW3 197 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 TMEM129A0AVI4 362 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 TMEM72A0PK05 275 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 CLDN24A6NM45 220 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 ZNF724A8MTY0 619 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 M0R233 179 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 PDLIM1O00151 329 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 AP3D1O14617 1153 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 RGS13O14921 159 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 PLPP2O43688 288 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 KRT33AO76009 404 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 KRT34O76011 436 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 SUPT7LO94864 414 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 KLHL2O95198 593 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 OTCP00480 354 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 KNG1P01042 644 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 CRYAAP02489 173 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 TFP02787 698 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 ALOX5P09917 674 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 PRPS2P11908 318 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 IMPDH2P12268 514 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 BCKDHAP12694 445 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 ATF4P18848 351 aaPredicted RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 NPR2P20594 1047 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 CRABP2P29373 138 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 MPIP34949 423 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 GNALP38405 381 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 EIF1P41567 113 aaKnown RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 SELENOPP49908 381 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 SESN3P58005 492 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 KRTAP10-3P60369 221 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 PRPS1P60891 318 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 UBE2NP61088 152 aaKnown RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 ERVS71-1P61550 626 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 LMO4P61968 165 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 TRA2BP62995 288 aaKnown RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 RPL38P63173 70 aaKnown RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 C2orf54Q08AI8 447 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 SCGB2A2Q13296 93 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 SKP2Q13309 424 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 TP53BP2Q13625 1128 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 FRG1Q14331 258 aaKnown RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 KIR3DS1Q14943 382 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 HEPACAMQ14CZ8 416 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 EFNB3Q15768 340 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 IMPG1Q17R60 797 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 SPIN4Q56A73 249 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 DCST2Q5T1A1 773 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 OTUD3Q5T2D3 398 aaPredicted RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 GRTP1Q5TC63 336 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms