RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 DNAJB3Q8WWF6 145 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 RXFP2Q8WXD0 754 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 C18orf25Q96B23 403 aaPredicted RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 ANKRD9Q96BM1 317 aaPredicted RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 LRRC39Q96DD0 335 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 CHMP6Q96FZ7 201 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 C1orf147Q96MC9 270 aaPredicted RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 SELENOSQ9BQE4 189 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 RPP25Q9BUL9 199 aaKnown RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 CALN1Q9BXU9 219 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 ELOVL4Q9GZR5 314 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 RPS10P5Q9NQ39 176 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 DUS2Q9NX74 493 aaKnown RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 CLEC5AQ9NY25 188 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 ZNF581Q9P0T4 197 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 ATXN10Q9UBB4 475 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 GHRLQ9UBU3 117 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 LGALS13Q9UHV8 139 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 MGAT4BQ9UQ53 548 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 AURKCQ9UQB9 309 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 IKBKGQ9Y6K9 419 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 RALGAPA1Q6GYQ0 2036 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 MYH9P35579 1960 aaKnown RBP4.82□□□□□ -1.64
NEDD4-203ENST00000502612 SMIM28A0A1B0GU29 152 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 EXOC1LA0A1B0GW35 172 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 FBLL1A6NHQ2 334 aaKnown RBP4.82□□□□□ -1.64
NEDD4-203ENST00000502612 ANKRD30BLA7E2S9 258 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 HACD1B0YJ81 288 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 XPO1O14980 1071 aaKnown RBP4.82□□□□□ -1.64
NEDD4-203ENST00000502612 SRPX2O60687 465 aaPredicted RBP4.82□□□□□ -1.64
NEDD4-203ENST00000502612 VPS26AO75436 327 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 KBTBD11O94819 623 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 GSTT2P0CG29 244 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 GSTT2BP0CG30 244 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 NCF1P14598 390 aaPredicted RBP4.82□□□□□ -1.64
NEDD4-203ENST00000502612 CYP2B6P20813 491 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 IVDP26440 423 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 HOXD10P28358 340 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 MIPP30301 263 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 CDK16Q00536 496 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 HSF2Q03933 536 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 SLC10A1Q14973 349 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 TRIP13Q15645 432 aaPredicted RBP4.82□□□□□ -1.64
NEDD4-203ENST00000502612 INAQ16352 499 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 SCYL2Q6P3W7 929 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 LEG1Q6P5S2 330 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 CCDC121Q6ZUS5 278 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 FAM183BPQ6ZVS7 135 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 LPCAT2Q7L5N7 544 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 NET1Q7Z628 596 aaPredicted RBP4.82□□□□□ -1.64
NEDD4-203ENST00000502612 ACOT1Q86TX2 421 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 MISPQ8IVT2 679 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 JOSD2Q8TAC2 188 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 UBA3Q8TBC4 463 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 ACTL9Q8TC94 416 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 PYROXD1Q8WU10 500 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 RSPH1Q8WYR4 309 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 RAPGEF5Q92565 580 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 FOXN4Q96NZ1 517 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 PPP1R2P1Q96PQ5 205 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 RNF157Q96PX1 679 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 XPO6Q96QU8 1125 aaKnown RBP4.82□□□□□ -1.64
NEDD4-203ENST00000502612 CCT8L2Q96SF2 557 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 VPS37BQ9H9H4 285 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 TRPV5Q9NQA5 729 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 C1orf123Q9NWV4 160 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 ANKMY1Q9P2S6 941 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 PCSK1NQ9UHG2 260 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 CDH9Q9ULB4 789 aa4.82□□□□□ -1.64
NEDD4-203ENST00000502612 RRP15Q9Y3B9 282 aaKnown RBP4.82□□□□□ -1.64
NEDD4-203ENST00000502612 ZSWIM8A7E2V4 1837 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 PLXNB2O15031 1838 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 GRIN2DO15399 1336 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 CLUHO75153 1309 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 SF3B1O75533 1304 aaKnown RBP eCLIP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 IGKV3D-20A0A0C4DH25 116 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 IQANK1A0A1B0GTG1 560 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 C11orf98E9PRG8 122 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 H0YHG0 523 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 H7C0C1 242 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 K7EPI3 171 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 TRDMT1O14717 391 aaKnown RBP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 SHBGP04278 402 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 ALPIP09923 528 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 PVRP15151 417 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 CYP2F1P24903 491 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 MAGEA9P43362 315 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 ATP5OP48047 213 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 RPL34P49207 117 aaKnown RBP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 DYNLT1P63172 113 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 BASP1P80723 227 aaKnown RBP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 OGDHQ02218 1023 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 PDIA2Q13087 525 aaKnown RBP4.81□□□□□ -1.64
NEDD4-203ENST00000502612 RUNX3Q13761 415 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 ITIH4Q14624 930 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 DPYSL2Q16555 572 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 PPP1R3AQ16821 1122 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 SLC25A52Q3SY17 297 aa4.81□□□□□ -1.64
NEDD4-203ENST00000502612 CCDC14Q49A88 953 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms