RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 THY1P04216 161 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 PNMTP11086 282 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 CRYGSP22914 178 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 CDH12P55289 794 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 TSC22D1Q15714 1073 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 ELOA3BQ3SY89 546 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 ALG10BQ5I7T1 473 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 OTUD3Q5T2D3 398 aaPredicted RBP12.72□□□□□ -0.37
SCAP-213ENST00000494938 SFRP5Q5T4F7 317 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 LINC00114Q6XXX2 140 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 Q6ZT83 130 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 P3H2Q8IVL5 708 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 ELOA3Q8NG57 546 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 MFSD8Q8NHS3 518 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 SLC47A1Q96FL8 570 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 MCHR1Q99705 422 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 HOPXQ9BPY8 73 aaPredicted RBP12.72□□□□□ -0.37
SCAP-213ENST00000494938 MED18Q9BUE0 208 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 HDHD5Q9BXW7 423 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 OR10A4Q9H209 315 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 LIME1Q9H400 295 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 FAM53CQ9NYF3 392 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 EMC3Q9P0I2 261 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 TESQ9UGI8 421 aaKnown RBP12.72□□□□□ -0.37
SCAP-213ENST00000494938 NOSIPQ9Y314 301 aaKnown RBP12.72□□□□□ -0.37
SCAP-213ENST00000494938 CREBBPQ92793 2442 aa12.72□□□□□ -0.37
SCAP-213ENST00000494938 FAM220BPB1ANY3 271 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 KLF4O43474 513 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 GOSR1O95249 250 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 PPP3CBP16298 524 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 LOXP28300 417 aaPredicted RBP12.71□□□□□ -0.37
SCAP-213ENST00000494938 KDELR2P33947 212 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 RPS5P46782 204 aaKnown RBP12.71□□□□□ -0.37
SCAP-213ENST00000494938 LTBQ06643 244 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 P2RY6Q15077 328 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 ERICH5Q6P6B1 374 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 HACD2Q6Y1H2 254 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 ZNF100Q8IYN0 542 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 MICU2Q8IYU8 434 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 CMTM5Q96DZ9 223 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 ZC3HAV1LQ96H79 300 aaKnown RBP12.71□□□□□ -0.37
SCAP-213ENST00000494938 SF3B5Q9BWJ5 86 aaKnown RBP12.71□□□□□ -0.37
SCAP-213ENST00000494938 TAPBPLQ9BX59 468 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 ACTR6Q9GZN1 396 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 NSRP1Q9H0G5 558 aaKnown RBP12.71□□□□□ -0.37
SCAP-213ENST00000494938 PLEKHF2Q9H8W4 249 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 FANCFQ9NPI8 374 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 ADPRHL2Q9NX46 363 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 ZNF226Q9NYT6 803 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 C6orf203Q9P0P8 240 aaPredicted RBP12.71□□□□□ -0.37
SCAP-213ENST00000494938 AP3M1Q9Y2T2 418 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 FLVCR1Q9Y5Y0 555 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 MYO9AB2RTY4 2548 aa12.71□□□□□ -0.37
SCAP-213ENST00000494938 ELOVL7A1L3X0 281 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 NME4O00746 187 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 CNOT4O95628 575 aaKnown RBP12.7□□□□□ -0.38
SCAP-213ENST00000494938 IGHV1-2P23083 117 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 PRDX6P30041 224 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 LIPEQ05469 1076 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 ITGADQ13349 1161 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 POU4F3Q15319 338 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 ENTPD8Q5MY95 495 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 FBXW9Q5XUX1 488 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 ZNF613Q6PF04 617 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 CDH24Q86UP0 819 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 RANBP3LQ86VV4 465 aaPredicted RBP12.7□□□□□ -0.38
SCAP-213ENST00000494938 STEAP2Q8NFT2 490 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 OR2T12Q8NG77 320 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 OR9K2Q8NGE7 335 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 VANGL1Q8TAA9 524 aaPredicted RBP12.7□□□□□ -0.38
SCAP-213ENST00000494938 SLC26A7Q8TE54 656 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 S100PBPQ96BU1 408 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 SLC25A36Q96CQ1 311 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 ZNF385AQ96PM9 386 aaKnown RBP12.7□□□□□ -0.38
SCAP-213ENST00000494938 PCDHAC1Q9H158 963 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 SEC14L4Q9UDX3 406 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 ARL2BPQ9Y2Y0 163 aa12.7□□□□□ -0.38
SCAP-213ENST00000494938 TRAV36DV7A0A075B6V5 113 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 MRPL33O75394 65 aaKnown RBP12.69□□□□□ -0.38
SCAP-213ENST00000494938 AHSA1O95433 338 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 IGHV3-9P01782 118 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 TNFRSF1BP20333 461 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 DNAJA1P31689 397 aaKnown RBP12.69□□□□□ -0.38
SCAP-213ENST00000494938 SLC7A2P52569 658 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 FOXG1P55316 489 aaPredicted RBP12.69□□□□□ -0.38
SCAP-213ENST00000494938 NCALDP61601 193 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 SWT1Q5T5J6 900 aaKnown RBP12.69□□□□□ -0.38
SCAP-213ENST00000494938 TMEM225Q6GV28 225 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 WDR88Q6ZMY6 472 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 CREB3L2Q70SY1 520 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 ARPINQ7Z6K5 226 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 EPHX4Q8IUS5 362 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 KDM8Q8N371 416 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 ZNF433Q8N7K0 673 aaPredicted RBP12.69□□□□□ -0.38
SCAP-213ENST00000494938 OR6S1Q8NH40 331 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 RASSF5Q8WWW0 418 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 TMEM45BQ96B21 275 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 APH1AQ96BI3 265 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 CCT8L2Q96SF2 557 aa12.69□□□□□ -0.38
SCAP-213ENST00000494938 TMEM43Q9BTV4 400 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms