RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 RSPO3Q9BXY4 272 aaPredicted RBP10.95□□□□□ -0.66
UPF3A-210ENST00000493727 AMBRA1Q9C0C7 1298 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 DSN1Q9H410 356 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 LDAHQ9H6V9 325 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 PTGES2Q9H7Z7 377 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 TMEM27Q9HBJ8 222 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 CTPS2Q9NRF8 586 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 ARMC1Q9NVT9 282 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 MED11Q9P086 117 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 TNFRSF10DQ9UBN6 386 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 DKKL1Q9UK85 242 aa10.95□□□□□ -0.66
UPF3A-210ENST00000493727 PINLYPA6NC86 204 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 FAM90A27PA6NNH2 459 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 HCN1O60741 890 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 TOXO94900 526 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 CST1P01037 141 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 PRG2P13727 222 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 GABRA1P14867 456 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 RHCEP18577 417 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 FASP25445 335 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 MAGEA2P43356 314 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 ZNF136P52737 540 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 NUP107P57740 925 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 TFF3Q07654 80 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 FOXO1Q12778 655 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 FOXD4Q12950 439 aaPredicted RBP10.94□□□□□ -0.66
UPF3A-210ENST00000493727 GANABQ14697 944 aaKnown RBP10.94□□□□□ -0.66
UPF3A-210ENST00000493727 NPTX1Q15818 432 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 EMC4Q5J8M3 183 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 WLSQ5T9L3 541 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 B3GNT6Q6ZMB0 384 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 PAPD5Q8NDF8 572 aaKnown RBP10.94□□□□□ -0.66
UPF3A-210ENST00000493727 PRRC1Q96M27 445 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 ZNF300Q96RE9 604 aaPredicted RBP10.94□□□□□ -0.66
UPF3A-210ENST00000493727 ZNF347Q96SE7 839 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 PIP5K1AQ99755 562 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 WFDC6Q9BQY6 131 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 FNDC11Q9BVV2 318 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 TRIM2Q9C040 744 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 PNPLA3Q9NST1 481 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 QPCTLQ9NXS2 382 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 TUBA8Q9NY65 449 aaPredicted RBP10.94□□□□□ -0.66
UPF3A-210ENST00000493727 TAS2R10Q9NYW0 307 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 NDUFAF4Q9P032 175 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 B4GALT7Q9UBV7 327 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 KCNN3Q9UGI6 736 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 PRDM4Q9UKN5 801 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 ACAD8Q9UKU7 415 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 TESMINQ9Y4I5 508 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 NSD1Q96L73 2696 aaPredicted RBP10.94□□□□□ -0.66
UPF3A-210ENST00000493727 NCKAP5O14513 1909 aa10.94□□□□□ -0.66
UPF3A-210ENST00000493727 HRNRQ86YZ3 2850 aaPredicted RBP10.93□□□□□ -0.66
UPF3A-210ENST00000493727 IGLV3-32A0A0A0MS00 114 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 J3KTA2 159 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 ADAMDEC1O15204 470 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 FMO6PO60774 539 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 TRIM3O75382 744 aaPredicted RBP10.93□□□□□ -0.66
UPF3A-210ENST00000493727 E2F6O75461 281 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 TCEA1P23193 301 aaKnown RBP10.93□□□□□ -0.66
UPF3A-210ENST00000493727 MAGEA5P43359 124 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 IDH2P48735 452 aaKnown RBP10.93□□□□□ -0.66
UPF3A-210ENST00000493727 ART1P52961 327 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 OR1Q1Q15612 314 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 NKPD1Q17RQ9 610 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 ENTPD8Q5MY95 495 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 SFRP5Q5T4F7 317 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 TIGD3Q6B0B8 471 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 WBP2NLQ6ICG8 309 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 OR2T5Q6IEZ7 315 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 PIWIL3Q7Z3Z3 882 aaKnown RBP10.93□□□□□ -0.66
UPF3A-210ENST00000493727 OR2M3Q8NG83 312 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 OR5M9Q8NGP3 310 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 OR2T29Q8NH02 315 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 C7orf34Q96L11 122 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 TTYH2Q9BSA4 534 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 POLR2J2Q9GZM3 115 aaKnown RBP10.93□□□□□ -0.66
UPF3A-210ENST00000493727 POLR2J3Q9H1A7 115 aaKnown RBP10.93□□□□□ -0.66
UPF3A-210ENST00000493727 EXO5Q9H790 373 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 PROK2Q9HC23 129 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 FBXL2Q9UKC9 423 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 ICAM5Q9UMF0 924 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 VDAC3Q9Y277 283 aa10.93□□□□□ -0.66
UPF3A-210ENST00000493727 FBN3Q75N90 2809 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 TRGV5A0A0B4J1U4 118 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 TRAPPC13A5PLN9 417 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 NKX2-6A6NCS4 301 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 H3BNX3 289 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 CLOCKO15516 846 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 OR5F1O95221 314 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 H1F0P07305 194 aaKnown RBP10.92□□□□□ -0.66
UPF3A-210ENST00000493727 GDF1P27539 372 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 HTR2AP28223 471 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 RRM2P31350 389 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 PEX19P40855 299 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 ACAA2P42765 397 aaKnown RBP10.92□□□□□ -0.66
UPF3A-210ENST00000493727 CDH12P55289 794 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 SMIM11AP58511 58 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 PIN1Q13526 163 aaPredicted RBP10.92□□□□□ -0.66
UPF3A-210ENST00000493727 QPRTQ15274 297 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 ATP6AP1Q15904 470 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms