RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 WDR45Q9Y484 360 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 V9GYY9 64 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 A2MP01023 1474 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 MYH10P35580 1976 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 TP53BP1Q12888 1972 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 SMG6Q86US8 1419 aaKnown RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ABCA10Q8WWZ4 1543 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 EVPLQ92817 2033 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 KIR2DL5BA0A0G2JN68 375 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 KIR2DL5BA0A0G2JPC4 375 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 A0A1W2PQ45 241 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 A0A1W2PQY0 241 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ANTXRLA6NF34 631 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 HIDE1A8MVS5 230 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 NPIPA5E9PKD4 350 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 NPIPA3F8WFD2 350 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 M0R3G1 203 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 TNFSF11O14788 317 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 RGS5O15539 181 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 CHST1O43916 411 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 RNASEH1O60930 286 aaKnown RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 SOX30O94993 753 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 MPZL1O95297 269 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 FARS2O95363 451 aaKnown RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 IGF2P01344 180 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ORM1P02763 201 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 IFNW1P05000 195 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ALDOBP05062 364 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 HOXB5P09067 269 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ACSM4P0C7M7 580 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 AKR1C4P17516 323 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 FMO3P31513 532 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ARRB2P32121 409 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 CNR2P34972 360 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 AKR1C3P42330 323 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 EFNA3P52797 238 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 TAS2R41P59536 307 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 KLRC3Q07444 240 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 C2orf80Q0P641 193 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 SEMA3BQ13214 749 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF169Q14929 603 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 HLA-BQ31612 363 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 MGAT5BQ3V5L5 792 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 SLC22A6Q4U2R8 563 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 PDZD11Q5EBL8 140 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 TPRG1LQ5T0D9 272 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 N4BP2L1Q5TBK1 243 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 LEMD1Q68G75 181 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 LRRC8EQ6NSJ5 796 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 LETMD1Q6P1Q0 360 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM65Q6PI78 240 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ATRAIDQ6UW56 229 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 CD164L2Q6UWJ8 174 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 FAM131AQ6UXB0 335 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 QSOX2Q6ZRP7 698 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 CREB3L2Q70SY1 520 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 DYMQ7RTS9 669 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 DTX1Q86Y01 620 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 KIR2DL5AQ8N109 375 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 C4orf33Q8N1A6 199 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 SPEM1Q8N4L4 309 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM217Q8N7C4 229 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 POC1AQ8NBT0 407 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 LFNGQ8NES3 379 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 OR4F15Q8NGB8 312 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 OR4A4PQ8NGN8 299 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 KIR2DL5BQ8NHK3 375 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ABHD4Q8TB40 342 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 PIK3R3Q92569 461 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 GCDHQ92947 438 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM203Q969S6 136 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ISOC2Q96AB3 205 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 FKBP10Q96AY3 582 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 MRPL53Q96EL3 112 aaKnown RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 PPP3R2Q96LZ3 170 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF512Q96ME7 567 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 FANCD2OSQ96PS1 177 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 CNN2Q99439 309 aaKnown RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ATF6BQ99941 703 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 VPS25Q9BRG1 176 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 THAP7Q9BT49 309 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 AMNQ9BXJ7 453 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 HDAC8Q9BY41 377 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ILKAPQ9H0C8 392 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 BOLA2Q9H3K6 86 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 L2HGDHQ9H9P8 463 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 FKRPQ9H9S5 495 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 SLC28A3Q9HAS3 691 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM27Q9HBJ8 222 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 GPR173Q9NS66 373 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 ASB6Q9NWX5 421 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 EBF1Q9UH73 591 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 NPIPA1Q9UND3 350 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 MRPS17Q9Y2R5 130 aaKnown RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 NME7Q9Y5B8 376 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 HEMK1Q9Y5R4 338 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 TTC37Q6PGP7 1564 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 MYH7P12883 1935 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms