RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SKAP2O75563 359 aaPredicted RBP11.43□□□□□ -0.58
USF1-206ENST00000491629 LYPLA1O75608 230 aaPredicted RBP11.43□□□□□ -0.58
USF1-206ENST00000491629 CHEK2O96017 543 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 CRYAAP02489 173 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 SHBGP04278 402 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 FKBP2P26885 142 aaKnown RBP11.43□□□□□ -0.58
USF1-206ENST00000491629 TACR3P29371 465 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 SELENOPP49908 381 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 WHAMMP3Q1A5X7 153 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 OTUD3Q5T2D3 398 aaPredicted RBP11.43□□□□□ -0.58
USF1-206ENST00000491629 BHLHB9Q6PI77 547 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 KLHL24Q6TFL4 600 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 C16orf62Q7Z3J2 963 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 CDK20Q8IZL9 346 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 POMGNT2Q8NAT1 580 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 NUP37Q8NFH4 326 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 AGR3Q8TD06 166 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 XAGE5Q8WWM1 108 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 PPP3R2Q96LZ3 170 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 RASSF4Q9H2L5 321 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 OBP2BQ9NPH6 170 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 PCDHGB4Q9UN71 923 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 WDR45Q9Y484 360 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 A0A0A6YYJ9 748 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 SH3PXD2BA1X283 911 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 LIPT2A6NK58 231 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 SLCO1B7G3V0H7 640 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 TRIM13O60858 407 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 UPK3AO75631 287 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 G6PDP11413 515 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 PRPS1L1P21108 318 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 MAPK1P28482 360 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 CCT5P48643 541 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 POLR2HP52434 150 aaKnown RBP11.42□□□□□ -0.58
USF1-206ENST00000491629 CEACAM7Q14002 265 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 ADRM1Q16186 407 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 C3orf36Q3SXR2 165 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 TNFAIP8L2Q6P589 184 aaPredicted RBP11.42□□□□□ -0.58
USF1-206ENST00000491629 C4orf33Q8N1A6 199 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 ARFGAP2Q8N6H7 521 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 NATD1Q8N6N6 113 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 CCDC63Q8NA47 563 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 UBASH3BQ8TF42 649 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 NEU4Q8WWR8 484 aaPredicted RBP11.42□□□□□ -0.58
USF1-206ENST00000491629 ROPN1LQ96C74 230 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 DDIT4LQ96D03 193 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 ALKBH3Q96Q83 286 aaPredicted RBP11.42□□□□□ -0.58
USF1-206ENST00000491629 NAA11Q9BSU3 229 aaPredicted RBP11.42□□□□□ -0.58
USF1-206ENST00000491629 MECRQ9BV79 373 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 RACGAP1Q9H0H5 632 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 ZNF442Q9H7R0 627 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 TMEM45AQ9NWC5 275 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 SPEF1Q9Y4P9 236 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 NOTCH1P46531 2555 aa11.42□□□□□ -0.58
USF1-206ENST00000491629 IGHV2OR16-5A0A0B4J2B6 119 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 AQP7P3A6NL99 342 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 TMEM229AB2RXF0 380 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 COPEO14579 308 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 ATP8B1O43520 1251 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 SNUPNO95149 360 aaKnown RBP11.41□□□□□ -0.58
USF1-206ENST00000491629 AVPP01185 164 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 ADRA2AP08913 450 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 IFNGR1P15260 489 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 NPR2P20594 1047 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 ALDH3A1P30838 453 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 SLC1A3P43003 542 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 ACTG1P63261 375 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 BNIP2Q12982 314 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 OR7A5Q15622 319 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 PGS1Q32NB8 556 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 ELFN2Q5R3F8 820 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 SPATA21Q7Z572 469 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 EPHX4Q8IUS5 362 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 FNDC5Q8NAU1 212 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 OR4F15Q8NGB8 312 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 CLDND2Q8NHS1 167 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 SGMS2Q8NHU3 365 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 MAGEE2Q8TD90 523 aaPredicted RBP11.41□□□□□ -0.58
USF1-206ENST00000491629 WDR60Q8WVS4 1066 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 OIT3Q8WWZ8 545 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 ZNF837Q96EG3 531 aaPredicted RBP11.41□□□□□ -0.58
USF1-206ENST00000491629 KCNS3Q9BQ31 491 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 SF3B5Q9BWJ5 86 aaKnown RBP11.41□□□□□ -0.58
USF1-206ENST00000491629 POLE3Q9NRF9 147 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 EXD2Q9NVH0 621 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.41□□□□□ -0.58
USF1-206ENST00000491629 ZDHHC2Q9UIJ5 367 aa11.41□□□□□ -0.58
USF1-206ENST00000491629 B4DSR2 109 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 ZNF587BE7ETH6 402 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 HMGN4O00479 90 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 NPHS1O60500 1241 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 KRT4P19013 534 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 COL8A2P25067 703 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 HTR3AP46098 478 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 KHKP50053 298 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 ARFIP2P53365 341 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 CLDN8P56748 225 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 SYPL1Q16563 259 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 SAXO2Q658L1 398 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms