RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 PNMA8CA0A1B0GUJ8 204 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 NDUFB2O95178 105 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 SERPINA7P05543 415 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 TFPIP10646 304 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 CEACAM1P13688 526 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 TGFBR1P36897 503 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 CD79BP40259 229 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 RPS7P62081 194 aaKnown RBP12.6□□□□□ -0.39
SMPD4-219ENST00000491128 MED22Q15528 200 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 LYPD4Q6UWN0 246 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 LNX2Q8N448 690 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 FAM98AQ8NCA5 519 aaKnown RBP12.6□□□□□ -0.39
SMPD4-219ENST00000491128 OR4K17Q8NGC6 315 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 OR13F1Q8NGS4 319 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 POC1BQ8TC44 478 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 ADAMTS17Q8TE56 1095 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 MYDGFQ969H8 173 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 Q96M85 177 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 TSSK2Q96PF2 358 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 TTTY10Q9BZA0 68 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 VCX3AQ9NNX9 186 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 DOCK10Q96BY6 2186 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 ARGFXA6NJG6 315 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 CDRT15L2A8MXV6 281 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 ZNF99A8MXY4 864 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-219ENST00000491128 LRRTM2O43300 516 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 CD63P08962 238 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 SHC1P29353 583 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 SFTPDP35247 375 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 SLC15A1P46059 708 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 ZNF41P51814 821 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-219ENST00000491128 RPL18Q07020 188 aaKnown RBP12.59□□□□□ -0.39
SMPD4-219ENST00000491128 OCLNQ16625 522 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 AADACL4Q5VUY2 407 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 SLC22A10Q63ZE4 541 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 LHFPL3Q86UP9 236 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 ZNF227Q86WZ6 799 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 DTX1Q86Y01 620 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 OR2M3Q8NG83 312 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 OR51G2Q8NGK0 314 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 IPCEF1Q8WWN9 437 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-219ENST00000491128 MUL1Q969V5 352 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 DGCR14Q96DF8 476 aaKnown RBP12.59□□□□□ -0.39
SMPD4-219ENST00000491128 LGALS12Q96DT0 336 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 Q96MT0 163 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 TMEM43Q9BTV4 400 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 TEX13CA0A0J9YWL9 993 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 SMIM31A0A1B0GVY4 71 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 A0A1W2PNR3 127 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 SH3D21A4FU49 640 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 CTXN1P60606 82 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 ITGADQ13349 1161 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 TMEM201Q5SNT2 666 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 C1orf140Q5VVS0 124 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 SLC37A3Q8NCC5 494 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 OR52I1Q8NGK6 324 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 RNF138Q8WVD3 245 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 ADAMTS14Q8WXS8 1223 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 ISOC1Q96CN7 298 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 DCUN1D5Q9BTE7 237 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 FAM192AQ9GZU8 254 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 RERGLQ9H628 205 aa12.59□□□□□ -0.39
SMPD4-219ENST00000491128 RPL36Q9Y3U8 105 aaKnown RBP12.59□□□□□ -0.39
SMPD4-219ENST00000491128 A0A1B0GVG6 124 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 ASAH2BP0C7U1 165 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 ADORA3P0DMS8 318 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 ICAM2P13598 275 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 HLA-DOBP13765 273 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 KLK2P20151 261 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 CSRP1P21291 193 aaKnown RBP12.58□□□□□ -0.4
SMPD4-219ENST00000491128 SLC6A6P31641 620 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 MTNR1AP48039 350 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 ETV1P50549 477 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 HCCSP53701 268 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 SNTA1Q13424 505 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 OR7A5Q15622 319 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 PLPPR5Q32ZL2 321 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 ALG10Q5BKT4 473 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 NANOGNBQ7Z5D8 188 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 MISPQ8IVT2 679 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 SMPDL3BQ92485 455 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 FOXN4Q96NZ1 517 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 SIGLEC12Q96PQ1 595 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 FUNDC2Q9BWH2 189 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 DEPPQ9NTK1 212 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 CHRNA9Q9UGM1 479 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 EXPH5Q8NEV8 1989 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 A0A1W2PQ72 361 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 PRODHO43272 600 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 SEC14L2O76054 403 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 BGLAPP02818 100 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 RFPL3SP0C7P2 107 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 GRPRP30550 384 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 ATP6V1E1P36543 226 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 LIPAP38571 399 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 NHLH1Q02575 133 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 OR2G6Q5TZ20 316 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 SLC15A4Q8N697 577 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 PAQR8Q8TEZ7 354 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms