RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 YAE1D1Q9NRH1 226 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 ZNF355PQ9NSJ1 428 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 AGPAT5Q9NUQ2 364 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 ARGLU1Q9NWB6 273 aaPredicted RBP1.55□□□□□ -2.16
SMC4-219ENST00000487747 RDH8Q9NYR8 311 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 CFAP73A6NFT4 308 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 STAMBPO95630 424 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 PSMC3P17980 439 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 GLP1RP43220 463 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 HMGCS1Q01581 520 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 SPP2Q13103 211 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 SLC39A6Q13433 755 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 MIER3Q7Z3K6 550 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 TPRA1Q86W33 373 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 ZNF679Q8IYX0 411 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 RBMXL1Q96E39 390 aaKnown RBP1.54□□□□□ -2.16
SMC4-219ENST00000487747 HPDLQ96IR7 371 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 CABS1Q96KC9 395 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 RHBGQ9H310 441 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 SRMSQ9H3Y6 488 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 ROPN1Q9HAT0 212 aaPredicted RBP1.54□□□□□ -2.16
SMC4-219ENST00000487747 SYTL2Q9HCH5 934 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 QPCTLQ9NXS2 382 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 STAP1Q9ULZ2 295 aa1.54□□□□□ -2.16
SMC4-219ENST00000487747 MN1Q10571 1320 aaPredicted RBP1.54□□□□□ -2.16
SMC4-219ENST00000487747 A0A1B0GUS0 222 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 A0A1B0GVX0 72 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 A0A1W2PP18 115 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 ARHGAP42A6NI28 874 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 OLFM2O95897 454 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 CNR1P21554 472 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 SLC26A5P58743 744 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 SMARCB1Q12824 385 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 TAF9Q16594 264 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 ZNF684Q5T5D7 378 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 C1QTNF12Q5T7M4 302 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 CCDC91Q7Z6B0 441 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 RGP1Q92546 391 aaPredicted RBP1.53□□□□□ -2.16
SMC4-219ENST00000487747 DNAJC19Q96DA6 116 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 TMEM246Q9BRR3 403 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 ATG10Q9H0Y0 220 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 SLCO1B3Q9NPD5 702 aa1.53□□□□□ -2.16
SMC4-219ENST00000487747 FRMPD4Q14CM0 1322 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 FAM170AA1A519 330 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 PEX7O00628 323 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 SDHDO14521 159 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 VAMP5O95183 116 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 TRIM16O95361 564 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 POLR2MP0CAP2 368 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 RRASP10301 218 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 TCN2P20062 427 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 FGF9P31371 208 aaPredicted RBP1.52□□□□□ -2.17
SMC4-219ENST00000487747 SFNP31947 248 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 EWSR1Q01844 656 aaKnown RBP eCLIP1.52□□□□□ -2.17
SMC4-219ENST00000487747 TRIM16LQ309B1 348 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 PARP10Q53GL7 1025 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 VAX1Q5SQQ9 334 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 FAM92BQ6ZTR7 304 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 IQCA1Q86XH1 822 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 CBWD2Q8IUF1 395 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 GRAMD2AQ8IUY3 354 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 ACTRT1Q8TDG2 376 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 GIPC3Q8TF64 312 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 XPO4Q9C0E2 1151 aaKnown RBP1.52□□□□□ -2.17
SMC4-219ENST00000487747 DHX33Q9H6R0 707 aaKnown RBP1.52□□□□□ -2.17
SMC4-219ENST00000487747 RNF167Q9H6Y7 350 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 SMYD3Q9H7B4 428 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 FETUBQ9UGM5 382 aa1.52□□□□□ -2.17
SMC4-219ENST00000487747 GSAPA4D1B5 854 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 RBMY1BA6NDE4 496 aaKnown RBP1.51□□□□□ -2.17
SMC4-219ENST00000487747 RBMY1EA6NEQ0 496 aaKnown RBP1.51□□□□□ -2.17
SMC4-219ENST00000487747 RBMY1DP0C7P1 496 aaKnown RBP1.51□□□□□ -2.17
SMC4-219ENST00000487747 P0C880 135 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 RBMY1A1P0DJD3 496 aaKnown RBP1.51□□□□□ -2.17
SMC4-219ENST00000487747 ZNF30P17039 623 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 POLR2EP19388 210 aaKnown RBP1.51□□□□□ -2.17
SMC4-219ENST00000487747 NPR2P20594 1047 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 SYCNQ0VAF6 134 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 RIPK1Q13546 671 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 SGCAQ16586 387 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 C2orf76Q3KRA6 126 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 KRTAP13-4Q3LI77 160 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 CCDC40Q4G0X9 1142 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 ETFRF1Q6IPR1 90 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 CATSPER1Q8NEC5 780 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 OR56B1Q8NGI3 324 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 PAGE5Q96GU1 130 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 NSMCE2Q96MF7 247 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 AATFQ9NY61 560 aaKnown RBP eCLIP1.51□□□□□ -2.174e-8■■■■■ 116
SMC4-219ENST00000487747 F11RQ9Y624 299 aaKnown RBP1.51□□□□□ -2.17
SMC4-219ENST00000487747 SEC16AO15027 2179 aa1.51□□□□□ -2.17
SMC4-219ENST00000487747 IGHV5-51A0A0C4DH38 117 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 SYCE3A1L190 88 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 SLC9B1P1A6NJY1 282 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 RBFOX2O43251 390 aaKnown RBP eCLIP1.5□□□□□ -2.173e-28■■■■■ 67
SMC4-219ENST00000487747 TPSB2P20231 275 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 ANXA13P27216 316 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 PTGFRP43088 359 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 DAP3P51398 398 aaKnown RBP1.5□□□□□ -2.17
SMC4-219ENST00000487747 TPSAB1Q15661 275 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms