RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SMIM23A6NLE4 172 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 NR5A2O00482 541 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 AP3D1O14617 1153 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 ZNF208O43345 1280 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 KRT33AO76009 404 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TPPPO94811 219 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 SNUPNO95149 360 aaKnown RBP6.41□□□□□ -1.38
CSDE1-206ENST00000483030 AKR7A3O95154 331 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 VENTXO95231 258 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 LGI1O95970 557 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 SHBGP04278 402 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TACSTD2P09758 323 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 G6PDP11413 515 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 KRT4P19013 534 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 GIFP27352 417 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TACR3P29371 465 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 ALDH3A1P30838 453 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 HTR3AP46098 478 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 POLR2HP52434 150 aaKnown RBP6.41□□□□□ -1.38
CSDE1-206ENST00000483030 UBE2NP61088 152 aaKnown RBP6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TUBA1BP68363 451 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TUBA4AP68366 448 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 NAAAQ02083 359 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 LGALS3BPQ08380 585 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 CEACAM7Q14002 265 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 EFNB3Q15768 340 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TBRG1Q3YBR2 411 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 XKR7Q5GH72 579 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 OTUD3Q5T2D3 398 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-206ENST00000483030 ATAD3BQ5T9A4 648 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 AP1ARQ63HQ0 302 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 OR4F3Q6IEY1 312 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TNFAIP8L2Q6P589 184 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-206ENST00000483030 PAQR6Q6TCH4 344 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 THSD4Q6ZMP0 1018 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 FRRS1Q6ZNA5 592 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 ZCCHC23Q6ZST2 131 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TUBA1AQ71U36 451 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 IFT20Q8IY31 132 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 C4orf33Q8N1A6 199 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TMEM99Q8N816 258 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 OR9K2Q8NGE7 335 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 OR1K1Q8NGR3 316 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 HPS1Q92902 700 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TMEM45BQ96B21 275 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 ROPN1LQ96C74 230 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 DDIT4LQ96D03 193 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 C16orf45Q96MC5 204 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-206ENST00000483030 DOK1Q99704 481 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 KATNB1Q9BVA0 655 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TXLNGYQ9BZA5 131 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 OBP2BQ9NPH6 170 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 MID2Q9UJV3 735 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 PCDHGB4Q9UN71 923 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 TMEM129A0AVI4 362 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 PRAMEF27A3QJZ7 478 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 VSTM5A8MXK1 200 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 LYNX1G3V0Z9 82 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 hCG_2039718K7EN88 272 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 NPHS1O60500 1241 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 SCN2BO60939 215 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 PDE5AO76074 875 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 CPSF4O95639 269 aaKnown RBP6.4□□□□□ -1.38
CSDE1-206ENST00000483030 AGR2O95994 175 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 ERCC1P07992 297 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-206ENST00000483030 GUSBP08236 651 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 CECR9P0C854 216 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 LYNX1P0DP58 116 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 IFNGR1P15260 489 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 EGR1P18146 543 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 CALCRP30988 508 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 THBS4P35443 961 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 SLC1A3P43003 542 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 PPOXP50336 477 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 GTF2A1P52655 376 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-206ENST00000483030 DVL1P1P54792 670 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-206ENST00000483030 CDH15P55291 814 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 CLDN8P56748 225 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 PLAURQ03405 335 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 HGFACQ04756 655 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 FUT5Q11128 374 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 CCNIQ14094 377 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 OR7A5Q15622 319 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 TRIP10Q15642 601 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 FAM174BQ3ZCQ3 159 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 GPAT3Q53EU6 434 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 C4orf48Q5BLP8 95 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 COX20Q5RI15 118 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 TMEM225Q6GV28 225 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 SPATA21Q7Z572 469 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 ABHD12BQ7Z5M8 362 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-206ENST00000483030 KRT77Q7Z794 578 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 GPAT4Q86UL3 456 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 ANKRD46Q86W74 232 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 ZNF786Q8N393 782 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 SVOPLQ8N434 492 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 C3orf56Q8N813 242 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 OR4F15Q8NGB8 312 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 OR4A15Q8NGL6 344 aa6.4□□□□□ -1.38
CSDE1-206ENST00000483030 MIPOL1Q8TD10 442 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms