RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 PTDSS2Q9BVG9 487 aa18.39■□□□□ 0.53
CDHR3-210ENST00000474330 ZNF696Q9H7X3 374 aa18.39■□□□□ 0.53
CDHR3-210ENST00000474330 FKRPQ9H9S5 495 aa18.39■□□□□ 0.53
CDHR3-210ENST00000474330 MCCC2Q9HCC0 563 aa18.39■□□□□ 0.53
CDHR3-210ENST00000474330 ZFP64Q9NPA5 681 aa18.39■□□□□ 0.53
CDHR3-210ENST00000474330 RASSF1Q9NS23 344 aa18.39■□□□□ 0.53
CDHR3-210ENST00000474330 ZNF229Q9UJW7 825 aa18.39■□□□□ 0.53
CDHR3-210ENST00000474330 BOKQ9UMX3 212 aaPredicted RBP18.39■□□□□ 0.53
CDHR3-210ENST00000474330 SPENQ96T58 3664 aaKnown RBP18.39■□□□□ 0.53
CDHR3-210ENST00000474330 PINLYPA6NC86 204 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 OR2T1O43869 369 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 MT-ATP6P00846 226 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 BGLAPP02818 100 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 FKBP2P26885 142 aaKnown RBP18.38■□□□□ 0.53
CDHR3-210ENST00000474330 SRD5A2P31213 254 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 RPS4XP62701 263 aaKnown RBP18.38■□□□□ 0.53
CDHR3-210ENST00000474330 ARG2P78540 354 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 TMEM44Q2T9K0 475 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 ANKDD1AQ495B1 522 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 CLEC12AQ5QGZ9 265 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 FAM69AQ5T7M9 428 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 ZNF843Q8N446 348 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 OR4Q3Q8NH05 313 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 CNIH3Q8TBE1 160 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 DDIT4LQ96D03 193 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 POTEKPQ9BYX7 375 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 ENKD1Q9H0I2 346 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 UBQLN3Q9H347 655 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 DKKL1Q9UK85 242 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 KLF13Q9Y2Y9 288 aaPredicted RBP18.38■□□□□ 0.53
CDHR3-210ENST00000474330 MRPS18CQ9Y3D5 142 aaKnown RBP18.38■□□□□ 0.53
CDHR3-210ENST00000474330 COL6A6A6NMZ7 2263 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 NME2P1O60361 137 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 NDUFB2O95178 105 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 AHSA1O95433 338 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 CD46P15529 392 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 NME2P22392 152 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 CXCR4P61073 352 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 FOXK1P85037 733 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 EFNB1P98172 346 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 TEKQ02763 1124 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.38■□□□□ 0.53
CDHR3-210ENST00000474330 RBM48Q5RL73 367 aaKnown RBP18.38■□□□□ 0.53
CDHR3-210ENST00000474330 C3orf33Q6P1S2 294 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 BORAQ6PGQ7 559 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 THSD4Q6ZMP0 1018 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 SULF2Q8IWU5 870 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 APH1BQ8WW43 257 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 DTNBP1Q96EV8 351 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 TEX12Q9BXU0 123 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 HES7Q9BYE0 225 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 PRRG3Q9BZD7 231 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 OR11A1Q9GZK7 315 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 TVP23BQ9NYZ1 205 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 AASSQ9UDR5 926 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 IL20RAQ9UHF4 553 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 HIF3AQ9Y2N7 669 aa18.38■□□□□ 0.53
CDHR3-210ENST00000474330 SPIN1Q9Y657 262 aaPredicted RBP18.38■□□□□ 0.53
CDHR3-210ENST00000474330 TLN1Q9Y490 2541 aaKnown RBP18.37■□□□□ 0.53
CDHR3-210ENST00000474330 NCKAP5O14513 1909 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 FREM3P0C091 2139 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 BHLHE40O14503 412 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 WBP4O75554 376 aaKnown RBP18.37■□□□□ 0.53
CDHR3-210ENST00000474330 TSPAN19P0C672 248 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 ZNF17P17021 662 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 IL11P20809 199 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 PRPS1P60891 318 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 SELENBP1Q13228 472 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 TOP3AQ13472 1001 aaPredicted RBP18.37■□□□□ 0.53
CDHR3-210ENST00000474330 PGGHGQ32M88 737 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 KCTD21Q4G0X4 260 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 PTCHD4Q6ZW05 846 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 OR8J1Q8NGP2 316 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 OR5M1Q8NGP8 315 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 SLC25A43Q8WUT9 341 aaPredicted RBP18.37■□□□□ 0.53
CDHR3-210ENST00000474330 POLDIP3Q9BY77 421 aaKnown RBP18.37■□□□□ 0.53
CDHR3-210ENST00000474330 BAIAP2Q9UQB8 552 aa18.37■□□□□ 0.53
CDHR3-210ENST00000474330 TNRC6AQ8NDV7 1962 aaKnown RBP18.36■□□□□ 0.53
CDHR3-210ENST00000474330 TRIM64A6NGJ6 449 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 EIF4E1BA6NMX2 242 aaKnown RBP18.36■□□□□ 0.53
CDHR3-210ENST00000474330 KLRC4-KLRK1H3BQV0 150 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 HMGN1P05114 100 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 RFPL3SP0C7P2 107 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 TCEA1P23193 301 aaKnown RBP18.36■□□□□ 0.53
CDHR3-210ENST00000474330 SLC6A6P31641 620 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 PCYT1AP49585 367 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 CLK1P49759 484 aaKnown RBP18.36■□□□□ 0.53
CDHR3-210ENST00000474330 SNRPGP62308 76 aaKnown RBP18.36■□□□□ 0.53
CDHR3-210ENST00000474330 SYT14P1Q58G82 188 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 MAMDC2Q7Z304 686 aaPredicted RBP18.36■□□□□ 0.53
CDHR3-210ENST00000474330 LNX2Q8N448 690 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 MFSD8Q8NHS3 518 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 ZNF566Q969W8 418 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 SCMH1Q96GD3 660 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 ARL5BQ96KC2 179 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 C5orf34Q96MH7 638 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 SLC38A2Q96QD8 506 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 ARHGAP9Q9BRR9 750 aa18.36■□□□□ 0.53
CDHR3-210ENST00000474330 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDHR3-210ENST00000474330 ADNPQ9H2P0 1102 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms