RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 PRKYO43930 277 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 TFAP2AP05549 437 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 CCNA2P20248 432 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 PAICSP22234 425 aaKnown RBP11.6□□□□□ -0.55
VPS13D-205ENST00000473099 GTF2E2P29084 291 aaKnown RBP11.6□□□□□ -0.55
VPS13D-205ENST00000473099 SRD5A2P31213 254 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 UQCRC1P31930 480 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 RPL4P36578 427 aaKnown RBP11.6□□□□□ -0.55
VPS13D-205ENST00000473099 CD96P40200 585 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 RPS5P46782 204 aaKnown RBP11.6□□□□□ -0.55
VPS13D-205ENST00000473099 CDH15P55291 814 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 CDC20Q12834 499 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 MFAP5Q13361 173 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 TMED1Q13445 227 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 FHL1Q13642 323 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 TUBA3CQ13748 450 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 SGCBQ16585 318 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 SMN1Q16637 294 aaKnown RBP11.6□□□□□ -0.55
VPS13D-205ENST00000473099 ST3GAL2Q16842 350 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 KLHL22Q53GT1 634 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 SYT14P1Q58G82 188 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 EMC4Q5J8M3 183 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 ARMC4Q5T2S8 1044 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 TUBA3EQ6PEY2 450 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 THSD4Q6ZMP0 1018 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 MDGA2Q7Z553 956 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 SCAIQ8N9R8 606 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 ZNF248Q8NDW4 579 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 OR5J2Q8NH18 312 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 C9orf43Q8TAL5 461 aaPredicted RBP11.6□□□□□ -0.55
VPS13D-205ENST00000473099 KCNE4Q8WWG9 221 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 LRR1Q96L50 414 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 FAM173AQ9BQD7 235 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 COPS4Q9BT78 406 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 TAPBPLQ9BX59 468 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 FAM192AQ9GZU8 254 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 FKBP14Q9NWM8 211 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 MRPL39Q9NYK5 338 aaKnown RBP11.6□□□□□ -0.55
VPS13D-205ENST00000473099 H2AFY2Q9P0M6 372 aaPredicted RBP11.6□□□□□ -0.55
VPS13D-205ENST00000473099 DKKL1Q9UK85 242 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 FBXL2Q9UKC9 423 aa11.6□□□□□ -0.55
VPS13D-205ENST00000473099 KLF13Q9Y2Y9 288 aaPredicted RBP11.6□□□□□ -0.55
VPS13D-205ENST00000473099 TNRC6AQ8NDV7 1962 aaKnown RBP11.59□□□□□ -0.55
VPS13D-205ENST00000473099 WDFY3Q8IZQ1 3526 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 TPRP12270 2363 aaKnown RBP11.59□□□□□ -0.55
VPS13D-205ENST00000473099 SMIM31A0A1B0GVY4 71 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 OR5H15A6NDH6 313 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 A6NHS1 94 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 B4DXG7 233 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 BLOC1S5-TXNDC5H3BN57 136 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 FZD7O75084 574 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 ENTPD6O75354 484 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 CD14P08571 375 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 JUNBP17275 347 aaPredicted RBP11.59□□□□□ -0.55
VPS13D-205ENST00000473099 IDUAP35475 653 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 FOXC1Q12948 553 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 OR1C1Q15619 314 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 ALG10Q5BKT4 473 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 NXNL2Q5VZ03 156 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 GPR139Q6DWJ6 353 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 AHSA2Q719I0 299 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 ZNF227Q86WZ6 799 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 STX19Q8N4C7 294 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 LRRC17Q8N6Y2 441 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 POC1BQ8TC44 478 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 FCGR1BQ92637 280 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 ZNF582Q96NG8 517 aaPredicted RBP11.59□□□□□ -0.55
VPS13D-205ENST00000473099 MOGAT1Q96PD6 335 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 ERMAPQ96PL5 475 aaPredicted RBP11.59□□□□□ -0.55
VPS13D-205ENST00000473099 TUBA1CQ9BQE3 449 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 PIGQQ9BRB3 760 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 PTDSS2Q9BVG9 487 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 NRIP3Q9NQ35 241 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 GPR83Q9NYM4 423 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 DNAJC27Q9NZQ0 273 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 B4GALT7Q9UBV7 327 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 HDGFL3Q9Y3E1 203 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 DNAJC13O75165 2243 aa11.59□□□□□ -0.55
VPS13D-205ENST00000473099 USP24Q9UPU5 2620 aa11.58□□□□□ -0.55
VPS13D-205ENST00000473099 MAP1BP46821 2468 aaKnown RBP11.58□□□□□ -0.56
VPS13D-205ENST00000473099 ZC3H12DA2A288 527 aaKnown RBP11.58□□□□□ -0.56
VPS13D-205ENST00000473099 DPPA5A6NC42 116 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 GJE1A6NN92 205 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 PRR23D1E9PI22 279 aaPredicted RBP11.58□□□□□ -0.56
VPS13D-205ENST00000473099 LINC01387J3KSC0 135 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 M0R129 80 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 NKX2-8O15522 239 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 NEURL1O76050 574 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 OR6A2O95222 327 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 PPP1R3DO95685 299 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 WDPCPO95876 746 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 CDK1P06493 297 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 PRR23D2P0DMB1 279 aaPredicted RBP11.58□□□□□ -0.56
VPS13D-205ENST00000473099 PRKAR1AP10644 381 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 TFPIP10646 304 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 CD46P15529 392 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 SLC15A1P46059 708 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 ALDH3B2P48448 385 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 LTBQ06643 244 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms