RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 PIF1Q9H611 641 aa11.36□□□□□ -0.59
PTPN7-207ENST00000468385 SEC61A2Q9H9S3 476 aa11.36□□□□□ -0.59
PTPN7-207ENST00000468385 TMEM45AQ9NWC5 275 aa11.36□□□□□ -0.59
PTPN7-207ENST00000468385 ARPC4-TTLL3A0A0A6YYG9 625 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 PRSS51A0A1B0GVH4 220 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 LIPT2A6NK58 231 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 AQP7P3A6NL99 342 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 HMGN4O00479 90 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 NR5A2O00482 541 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 IGLV1-44P01699 117 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 CRYAAP02489 173 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 GPIP06744 558 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 CHRM4P08173 479 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 CECR9P0C854 216 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 SELENOPP49908 381 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 P2RY4P51582 365 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 TUBA1BP68363 451 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 TUBA4AP68366 448 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 HPCAP84074 193 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 RUNX1T1Q06455 604 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 EPS8Q12929 822 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 CASP8Q14790 479 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 OR7A5Q15622 319 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 SYPL1Q16563 259 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 SMU1Q2TAY7 513 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 C3orf36Q3SXR2 165 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 TUBA1AQ71U36 451 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 LINGO2Q7L985 606 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 ABHD12BQ7Z5M8 362 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-207ENST00000468385 GPAT4Q86UL3 456 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 CMIPQ8IY22 773 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 ANKFN1Q8N957 763 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 TCP10LQ8TDR4 215 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 BCL2L2Q92843 193 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-207ENST00000468385 RAB1BQ9H0U4 201 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 SLC38A1Q9H2H9 487 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 NELFAQ9H3P2 528 aa11.35□□□□□ -0.59
PTPN7-207ENST00000468385 MARCOQ9UEW3 520 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-207ENST00000468385 TMEFF2Q9UIK5 374 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-207ENST00000468385 CFAP73A6NFT4 308 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 AGAP5A6NIR3 686 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 ZNF587BE7ETH6 402 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 WIPF1O43516 503 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 SPAG7O75391 227 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 DAOP14920 347 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 RPS4Y1P22090 263 aaKnown RBP11.34□□□□□ -0.59
PTPN7-207ENST00000468385 PAX7P23759 505 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 CHN2P52757 468 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 UBE2NP61088 152 aaKnown RBP11.34□□□□□ -0.59
PTPN7-207ENST00000468385 HGFACQ04756 655 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 ANXA8L1Q5VT79 327 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 CREB3L2Q70SY1 520 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 ZCCHC24Q8N2G6 241 aaKnown RBP11.34□□□□□ -0.59
PTPN7-207ENST00000468385 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.34□□□□□ -0.59
PTPN7-207ENST00000468385 EIF1ADQ8N9N8 165 aaKnown RBP11.34□□□□□ -0.59
PTPN7-207ENST00000468385 LINC01356Q8N9X3 169 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 NUP37Q8NFH4 326 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 MAGEE2Q8TD90 523 aaPredicted RBP11.34□□□□□ -0.59
PTPN7-207ENST00000468385 WDR60Q8WVS4 1066 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 NEU4Q8WWR8 484 aaPredicted RBP11.34□□□□□ -0.59
PTPN7-207ENST00000468385 HPS1Q92902 700 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 PPP1R36Q96LQ0 422 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 TRNT1Q96Q11 434 aaKnown RBP11.34□□□□□ -0.59
PTPN7-207ENST00000468385 ALKBH3Q96Q83 286 aaPredicted RBP11.34□□□□□ -0.59
PTPN7-207ENST00000468385 DOK1Q99704 481 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 SLC35A5Q9BS91 424 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 DPY30Q9C005 99 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 AKTIPQ9H8T0 292 aa11.34□□□□□ -0.59
PTPN7-207ENST00000468385 A0A096LPE4 126 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 A0A1W2PPZ6 126 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 TMEM129A0AVI4 362 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 TLDC2A0PJX2 215 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 hCG_2039718K7EN88 272 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 UPK3AO75631 287 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 KRT33AO76009 404 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 IGKV3-15P01624 115 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 BPGMP07738 259 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 IGFBP1P08833 259 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-207ENST00000468385 APEX1P27695 318 aaKnown RBP11.33□□□□□ -0.6
PTPN7-207ENST00000468385 CFPP27918 469 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 THBS4P35443 961 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 CHI3L1P36222 383 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-207ENST00000468385 SRP14P37108 136 aaKnown RBP11.33□□□□□ -0.6
PTPN7-207ENST00000468385 CDH15P55291 814 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 TRIP10Q15642 601 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 PDCD2Q16342 344 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-207ENST00000468385 GSTA3Q16772 222 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 SPANXN4Q5MJ08 99 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 MRPL2Q5T653 305 aaKnown RBP11.33□□□□□ -0.6
PTPN7-207ENST00000468385 C12orf54Q6X4T0 127 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 LRRC74BQ6ZQY2 392 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 MYPOPQ86VE0 399 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-207ENST00000468385 RNF130Q86XS8 419 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 EPHX4Q8IUS5 362 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 ZNF786Q8N393 782 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 FAM169BQ8N8A8 192 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 VPS37AQ8NEZ2 397 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 OR4F15Q8NGB8 312 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 TESCQ96BS2 214 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 ZIM3Q96PE6 472 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms