RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 IER3IP1Q9Y5U9 82 aa16.63■□□□□ 0.25
COL9A3-205ENST00000466192 CPAMD8Q8IZJ3 1885 aa16.63■□□□□ 0.25
COL9A3-205ENST00000466192 LNP1A1A4G5 178 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 IFNGP01579 166 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 GP1BAP07359 652 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 HIST1H1CP16403 213 aaKnown RBP16.62■□□□□ 0.25
COL9A3-205ENST00000466192 AVPR2P30518 371 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 RPL4P36578 427 aaKnown RBP16.62■□□□□ 0.25
COL9A3-205ENST00000466192 BCAP31P51572 246 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 RPS4XP62701 263 aaKnown RBP16.62■□□□□ 0.25
COL9A3-205ENST00000466192 PSPHP78330 225 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 TUBA3EQ6PEY2 450 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 SYT14Q8NB59 555 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 SMAP2Q8WU79 429 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-205ENST00000466192 KCTD7Q96MP8 289 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 MOGAT1Q96PD6 335 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 ALG8Q9BVK2 526 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 ABCB10Q9NRK6 738 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 CAB39Q9Y376 341 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-205ENST00000466192 DAPL1A0PJW8 107 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 RGS5O15539 181 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 WISP1O95388 367 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 IGF2P01344 180 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 CLEC2LP0C7M8 214 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 SLC2A5P22732 501 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 FBXW4P57775 412 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 ZNF74Q16587 644 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 TMPRSS11AQ6ZMR5 421 aa16.62■□□□□ 0.25
COL9A3-205ENST00000466192 FAM98AQ8NCA5 519 aaKnown RBP16.62■□□□□ 0.25
COL9A3-205ENST00000466192 TBX1O43435 398 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 NUDT14O95848 222 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 SDC2P34741 201 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 SLC26A5P58743 744 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 ZNF45Q02386 682 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 SPANXN2Q5MJ10 180 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 ARMC4Q5T2S8 1044 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 OR5W2Q8NH69 310 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 DCLRE1CQ96SD1 692 aaKnown RBP16.61■□□□□ 0.25
COL9A3-205ENST00000466192 TIMP4Q99727 224 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 HDHD5Q9BXW7 423 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 MROQ9BYG7 248 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 WDR54Q9H977 334 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 C12orf10Q9HB07 376 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 SMURF1Q9HCE7 757 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 MMP25Q9NPA2 562 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 CRNNQ9UBG3 495 aaPredicted RBP16.61■□□□□ 0.25
COL9A3-205ENST00000466192 A0A075B6Q4 140 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 TEX51A0A1B0GUA7 166 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 SMIM30A4D0T7 59 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 HTR3EA5X5Y0 456 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 UPK1BO75841 260 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 IL1AP01583 271 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 SBK2P0C263 348 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 LTBQ06643 244 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 ACSM1Q08AH1 577 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 DNASE1L3Q13609 305 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 OXA1LQ15070 435 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 GHDCQ8N2G8 530 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 C10orf53Q8N6V4 93 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 ATP6V1C2Q8NEY4 427 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 MOSPD2Q8NHP6 518 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 DUSP19Q8WTR2 217 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 LIPHQ8WWY8 451 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 SLC25A46Q96AG3 418 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 KTI12Q96EK9 354 aaPredicted RBP16.61■□□□□ 0.25
COL9A3-205ENST00000466192 CEP19Q96LK0 163 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 SIAEQ9HAT2 523 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 ADGRL4Q9HBW9 690 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 POLE4Q9NR33 117 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 KLHL1Q9NR64 748 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 C19orf25Q9UFG5 118 aaPredicted RBP16.61■□□□□ 0.25
COL9A3-205ENST00000466192 GSTK1Q9Y2Q3 226 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 PCDHGB2Q9Y5G2 931 aa16.61■□□□□ 0.25
COL9A3-205ENST00000466192 PGCP20142 388 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 RUNX1T1Q06455 604 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 HNRNPA0Q13151 305 aaKnown RBP16.6■□□□□ 0.25
COL9A3-205ENST00000466192 GALEQ14376 348 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 INSL4Q14641 139 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 CCDC92Q53HC0 331 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-205ENST00000466192 VASNQ6EMK4 673 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 CD200R1LQ6Q8B3 271 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 DPY19L2P2Q6ZN68 376 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 OR51L1Q8NGJ5 315 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 MR1Q95460 341 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 NEURL2Q9BR09 285 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 ULBP3Q9BZM4 244 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 NRIP3Q9NQ35 241 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 NANSQ9NR45 359 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 BLOC1S5-TXNDC5H3BN57 136 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 FLRT2O43155 660 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 KLK3P07288 261 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-205ENST00000466192 GTF2E2P29084 291 aaKnown RBP16.6■□□□□ 0.25
COL9A3-205ENST00000466192 P2RX1P51575 399 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 CBFBQ13951 182 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 EFR3AQ14156 821 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 PLA2G2CQ5R387 149 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 POMZP3Q6PJE2 187 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 FAM198BQ6UWH4 519 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 CCDC190Q86UF4 302 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 OR8K3Q8NH51 312 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms