RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CDH12P55289 794 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 SNTB1Q13884 538 aaKnown RBP15.64■□□□□ 0.09
CPSF4-209ENST00000465132 HSPB2Q16082 182 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 SGCBQ16585 318 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 COMTD1Q86VU5 262 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 RBM45Q8IUH3 476 aaKnown RBP15.64■□□□□ 0.09
CPSF4-209ENST00000465132 LACC1Q8IV20 430 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 RNF113BQ8IZP6 322 aaKnown RBP15.64■□□□□ 0.09
CPSF4-209ENST00000465132 OR6S1Q8NH40 331 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 ZPLD1Q8TCW7 415 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 POM121Q96HA1 1249 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 TAPBPLQ9BX59 468 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 RSPO3Q9BXY4 272 aaPredicted RBP15.64■□□□□ 0.09
CPSF4-209ENST00000465132 ST6GALNAC2Q9UJ37 374 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 CAMK2AQ9UQM7 478 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 TRAPPC4Q9Y296 219 aa15.64■□□□□ 0.09
CPSF4-209ENST00000465132 A0A1W2PRQ8 180 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 hCG_2039718K7EN88 272 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 EIF1AYO14602 144 aaKnown RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 EIF1BO60739 113 aaKnown RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 AHSA1O95433 338 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 SYNGR4O95473 234 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 IGF2P01344 180 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 FCGR2AP12318 317 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 GTF2E2P29084 291 aaKnown RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 UQCRC1P31930 480 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 IDUAP35475 653 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 IFNGR2P38484 337 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 PEX19P40855 299 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 CARD18P57730 90 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 VLDLRP98155 873 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 PIN1Q13526 163 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 DGCR6Q14129 220 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 TAF11Q15544 211 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 TMEM176BQ3YBM2 270 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 GTF2IRD2BQ6EKJ0 949 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 GTF2IRD2Q86UP8 949 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 TGIF2LYQ8IUE0 185 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 ADGRG5Q8IZF4 528 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 FAM86B1Q8N7N1 296 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 RELL2Q8NC24 303 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 ATP6V1C2Q8NEY4 427 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 OR4D11Q8NGI4 311 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 OR5M1Q8NGP8 315 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 CANT1Q8WVQ1 401 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 SMPDL3BQ92485 455 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 UTP4Q969X6 686 aaKnown RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 CPNE4Q96A23 557 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 DUS3LQ96G46 650 aaKnown RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 CHID1Q9BWS9 393 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 CLEC4MQ9H2X3 399 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 LIME1Q9H400 295 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 RASSF1Q9NS23 344 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 ARMC1Q9NVT9 282 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 CRIM1Q9NZV1 1036 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 MCTS1Q9ULC4 181 aaKnown RBP15.63■□□□□ 0.09
CPSF4-209ENST00000465132 A4GNTQ9UNA3 340 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 AP4S1Q9Y587 144 aa15.63■□□□□ 0.09
CPSF4-209ENST00000465132 ITPR3Q14573 2671 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 SULT2B1O00204 365 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 TPST2O60704 377 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 DEAF1O75398 565 aaPredicted RBP15.62■□□□□ 0.09
CPSF4-209ENST00000465132 GADD45GO95257 159 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 PMS2P2O95744 297 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 BMP5P22003 454 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 SFTPDP35247 375 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 SLC35A1P78382 337 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 HBMQ6B0K9 141 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 UBQLNLQ8IYU4 475 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 NAXEQ8NCW5 288 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 PAPD5Q8NDF8 572 aaKnown RBP15.62■□□□□ 0.09
CPSF4-209ENST00000465132 OR2V1Q8NHB1 315 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 WDYHV1Q96HA8 205 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 OR5B2Q96R09 309 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 NAA11Q9BSU3 229 aaPredicted RBP15.62■□□□□ 0.09
CPSF4-209ENST00000465132 REEP1Q9H902 201 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 NMNAT1Q9HAN9 279 aaPredicted RBP15.62■□□□□ 0.09
CPSF4-209ENST00000465132 MED31Q9Y3C7 131 aa15.62■□□□□ 0.09
CPSF4-209ENST00000465132 PRRC2AP48634 2157 aaKnown RBP15.61■□□□□ 0.09
CPSF4-209ENST00000465132 TRAV36DV7A0A075B6V5 113 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 SHISA8B8ZZ34 492 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 DVL2O14641 736 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 SEC14L5O43304 696 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 FKBP6O75344 327 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 MT-ATP6P00846 226 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 CST1P01037 141 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 CCNA2P20248 432 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 RRM2P31350 389 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 CEACAM8P31997 349 aaPredicted RBP15.61■□□□□ 0.09
CPSF4-209ENST00000465132 STARP49675 285 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 ASCL1P50553 236 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 CLDN18P56856 261 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 RAC3P60763 192 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 SPIBQ01892 262 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 SRYQ05066 204 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 ACSF3Q4G176 576 aaPredicted RBP15.61■□□□□ 0.09
CPSF4-209ENST00000465132 DCST1Q5T197 706 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 C1orf140Q5VVS0 124 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 OR2T5Q6IEZ7 315 aa15.61■□□□□ 0.09
CPSF4-209ENST00000465132 LINC00114Q6XXX2 140 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms