RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 CDH11P55287 796 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 LTBQ06643 244 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 SPOCK1Q08629 439 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 TSPO2Q5TGU0 170 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 AAED1Q7RTV5 226 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 OR9K2Q8NGE7 335 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 SMAP2Q8WU79 429 aaPredicted RBP16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 CKAP2Q8WWK9 683 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 GTPBP3Q969Y2 492 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 MAGEB18Q96M61 343 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 ZNF385AQ96PM9 386 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 TRIM2Q9C040 744 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 IKZF5Q9H5V7 419 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 SLC52A3Q9NQ40 469 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 ZNF701Q9NV72 531 aaPredicted RBP16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 PARPBPQ9NWS1 579 aa16.96■□□□□ 0.31
CCHCR1-210ENST00000464012 HEATR1Q9H583 2144 aaKnown RBP16.96■□□□□ 0.3
CCHCR1-210ENST00000464012 TMEM229AB2RXF0 380 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 SHISA9B4DS77 424 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 M0R1B8 84 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 AHSA1O95433 338 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 HOXB4P17483 251 aaPredicted RBP16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 CDK6Q00534 326 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 GABRA6Q16445 453 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 TMEM225Q6GV28 225 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 REEP3Q6NUK4 255 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 SLC25A36Q96CQ1 311 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 C1QTNF6Q9BXI9 259 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 NPHS2Q9NP85 383 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 CISD1Q9NZ45 108 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 DCTN4Q9UJW0 460 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 SLC25A15Q9Y619 301 aa16.95■□□□□ 0.3
CCHCR1-210ENST00000464012 TRBV5-3A0A0A0MS03 114 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 ELOA3DA6NLF2 546 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 EVPLLA8MZ36 301 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 TMCC2O75069 709 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 LY6G6DO95868 133 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 DANCRP0C864 163 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 ETS2P15036 469 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 PAX1P15863 534 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 CDH2P19022 906 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 PTNP21246 168 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 GTF2E2P29084 291 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 AQP1P29972 269 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 RPS5P46782 204 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 SCARB2Q14108 478 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 PGGHGQ32M88 737 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 ELOA3BQ3SY89 546 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 GLIPR1L2Q4G1C9 344 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 OR7E24Q6IFN5 339 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 TMEM108Q6UXF1 575 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 SSX8Q7RTT4 187 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 COMTD1Q86VU5 262 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 KRT73Q86Y46 540 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 ZIC4Q8N9L1 334 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 ELOA3Q8NG57 546 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 RNF217Q8TC41 542 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 STK35Q8TDR2 534 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 TMEM45BQ96B21 275 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 TRMT61AQ96FX7 289 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 CPPED1Q9BRF8 314 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 SF3B5Q9BWJ5 86 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 RSPO3Q9BXY4 272 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 SLCO5A1Q9H2Y9 848 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 ALG2Q9H553 416 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 VIPAS39Q9H9C1 493 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 POU2F3Q9UKI9 436 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 NF1P21359 2839 aa16.94■□□□□ 0.3
CCHCR1-210ENST00000464012 PDLIM1O00151 329 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 TPST1O60507 370 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 HEXAP06865 529 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 H2AFXP16104 143 aaPredicted RBP16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 PRKAR1BP31321 381 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 P2RY4P51582 365 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 NCALDP61601 193 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 SLC22A25Q6T423 547 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 KLHL17Q6TDP4 642 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 DHDDSQ86SQ9 333 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 MUS81Q96NY9 551 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 SPATA5L1Q9BVQ7 753 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 RABEP2Q9H5N1 569 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 LEF1Q9UJU2 399 aaPredicted RBP16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 PRDM4Q9UKN5 801 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 CORO2BQ9UQ03 480 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 ZFHX3Q15911 3703 aa16.93■□□□□ 0.3
CCHCR1-210ENST00000464012 FAM171A2A8MVW0 826 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 OVOL3O00110 214 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 NPIPB7O75200 414 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 KRT33AO76009 404 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 SLC6A2P23975 617 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 HTR2AP28223 471 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 IRX1P78414 480 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 SLC25A3Q00325 362 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 EGR4Q05215 589 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 LGALS3BPQ08380 585 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 VEZF1Q14119 521 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 NIPAL3Q6P499 406 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 DHRS4L2Q6PKH6 230 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 WDR31Q8NA23 367 aa16.92■□□□□ 0.3
CCHCR1-210ENST00000464012 SLC35B4Q969S0 331 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms