RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 A0A1W2PPZ6 126 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 TMEM72A0PK05 275 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 OR6C65A6NJZ3 312 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 NR5A2O00482 541 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 PIP5K1BO14986 540 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 BCAS1O75363 584 aaPredicted RBP12.52□□□□□ -0.41
SMC1A-204ENST00000463684 AKR7A3O95154 331 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 IGLV1-44P01699 117 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 GPIP06744 558 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 GUSBP08236 651 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 HOXB1P14653 301 aaPredicted RBP12.52□□□□□ -0.41
SMC1A-204ENST00000463684 ECHS1P30084 290 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 LIMS1P48059 325 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 TUBA1BP68363 451 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 TUBA4AP68366 448 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 HGFACQ04756 655 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 CEACAM7Q14002 265 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 PGS1Q32NB8 556 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 ATP6AP1LQ52LC2 224 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 TYW3Q6IPR3 259 aaKnown RBP12.52□□□□□ -0.41
SMC1A-204ENST00000463684 FAHD2BQ6P2I3 314 aaPredicted RBP12.52□□□□□ -0.41
SMC1A-204ENST00000463684 THSD4Q6ZMP0 1018 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 TUBA1AQ71U36 451 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 TRMT10CQ7L0Y3 403 aaKnown RBP12.52□□□□□ -0.41
SMC1A-204ENST00000463684 CLEC4FQ8N1N0 589 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 KRTCAP2Q8N6L1 136 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 TMEM99Q8N816 258 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 MAGEE2Q8TD90 523 aaPredicted RBP12.52□□□□□ -0.41
SMC1A-204ENST00000463684 MZB1Q8WU39 189 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 FAHD2AQ96GK7 314 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 LRRC37BQ96QE4 947 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 SERHL2Q9H4I8 314 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 LPAR2Q9HBW0 351 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 USP22Q9UPT9 525 aa12.52□□□□□ -0.41
SMC1A-204ENST00000463684 RNF103-CHMP3A0A140T963 221 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 TMEM129A0AVI4 362 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 RIPK2O43353 540 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 SCN2BO60939 215 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 MSMBP08118 114 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 FGF4P08620 206 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 OR12D1P0DN82 309 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 TACR3P29371 465 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 CRHR1P34998 444 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 GPR6P46095 362 aaPredicted RBP12.51□□□□□ -0.41
SMC1A-204ENST00000463684 OR7A5Q15622 319 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 PDLIM3Q53GG5 364 aaPredicted RBP12.51□□□□□ -0.41
SMC1A-204ENST00000463684 PRR31Q5SQ13 230 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 IL23RQ5VWK5 629 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 AP1ARQ63HQ0 302 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 C10orf107Q8IVU9 208 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 OR51F2Q8NH61 342 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 CLDND2Q8NHS1 167 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 C1orf50Q9BV19 199 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 TPK1Q9H3S4 243 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 NARFLQ9H6Q4 476 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 GRPEL1Q9HAV7 217 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 GIMAP2Q9UG22 337 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 CMAHPQ9Y471 501 aa12.51□□□□□ -0.41
SMC1A-204ENST00000463684 ZC3H12DA2A288 527 aaKnown RBP12.5□□□□□ -0.41
SMC1A-204ENST00000463684 AQP7P3A6NL99 342 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 AP3D1O14617 1153 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 IGKV3-15P01624 115 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 TFP02787 698 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 UQCRBP14927 111 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 CBR1P16152 277 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 EPHA1P21709 976 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 CXCR1P25024 350 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 SELENOPP49908 381 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 HPCAP84074 193 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 DAG1Q14118 895 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 UGT3A2Q3SY77 523 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 SLC9B1Q4ZJI4 515 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 GPAT3Q53EU6 434 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 AWAT1Q58HT5 328 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 HMGN2P46Q86SG4 172 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 RIMKLAQ8IXN7 391 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 CDK20Q8IZL9 346 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 FNDC5Q8NAU1 212 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 IL17RDQ8NFM7 739 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 MIPOL1Q8TD10 442 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 CNOT9Q92600 299 aaKnown RBP12.5□□□□□ -0.41
SMC1A-204ENST00000463684 ROPN1LQ96C74 230 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 ZG16BQ96DA0 208 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 ALKBH3Q96Q83 286 aaPredicted RBP12.5□□□□□ -0.41
SMC1A-204ENST00000463684 GATA5Q9BWX5 397 aaPredicted RBP12.5□□□□□ -0.41
SMC1A-204ENST00000463684 TAPBPLQ9BX59 468 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 MS4A5Q9H3V2 200 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 ZNF696Q9H7X3 374 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 SEC61A2Q9H9S3 476 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 MID2Q9UJV3 735 aa12.5□□□□□ -0.41
SMC1A-204ENST00000463684 IGHV2OR16-5A0A0B4J2B6 119 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 LIPT2A6NK58 231 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 CLDN24A6NM45 220 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 TMEM233B4DJY2 109 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 COPEO14579 308 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 SYNGR3O43761 229 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 TRIM13O60858 407 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 VAMP5O95183 116 aa12.49□□□□□ -0.41
SMC1A-204ENST00000463684 SAGP10523 405 aaPredicted RBP12.49□□□□□ -0.41
SMC1A-204ENST00000463684 ANPEPP15144 967 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms