RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 OR7A5Q15622 319 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 FAM153CQ494X1 144 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 PRR31Q5SQ13 230 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 TYW3Q6IPR3 259 aaKnown RBP11.88□□□□□ -0.51
PABPC4-208ENST00000461578 FAHD2BQ6P2I3 314 aaPredicted RBP11.88□□□□□ -0.51
PABPC4-208ENST00000461578 PAQR6Q6TCH4 344 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 LINGO2Q7L985 606 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 CLECL1Q8IZS7 167 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 MZB1Q8WU39 189 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 TWIST2Q8WVJ9 160 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 XAGE5Q8WWM1 108 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 BCL2L2Q92843 193 aaPredicted RBP11.88□□□□□ -0.51
PABPC4-208ENST00000461578 ZG16BQ96DA0 208 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 FAHD2AQ96GK7 314 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 ANKRD27Q96NW4 1050 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 ZNF442Q9H7R0 627 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 EXD2Q9NVH0 621 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 TREM2Q9NZC2 230 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 PSMC3IPQ9P2W1 217 aaPredicted RBP11.88□□□□□ -0.51
PABPC4-208ENST00000461578 CRNNQ9UBG3 495 aaPredicted RBP11.88□□□□□ -0.51
PABPC4-208ENST00000461578 USP22Q9UPT9 525 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 WDR45Q9Y484 360 aa11.88□□□□□ -0.51
PABPC4-208ENST00000461578 LOC105371242A0A075B767 164 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 ARPC4-TTLL3A0A0A6YYG9 625 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 RNF103-CHMP3A0A140T963 221 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 VSTM5A8MXK1 200 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 WNT9BO14905 357 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 SCN2BO60939 215 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 IGLV1-44P01699 117 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 ABHD2P08910 425 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 OR12D1P0DN82 309 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 SAGP10523 405 aaPredicted RBP11.87□□□□□ -0.51
PABPC4-208ENST00000461578 TCN1P20061 433 aaPredicted RBP11.87□□□□□ -0.51
PABPC4-208ENST00000461578 TACR3P29371 465 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 GPR6P46095 362 aaPredicted RBP11.87□□□□□ -0.51
PABPC4-208ENST00000461578 POLR2HP52434 150 aaKnown RBP11.87□□□□□ -0.51
PABPC4-208ENST00000461578 KCNJ10P78508 379 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 NPRL3Q12980 569 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 PGS1Q32NB8 556 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 CCDC153Q494R4 210 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 KRT80Q6KB66 452 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 NIPAL3Q6P499 406 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 TNFAIP8L2Q6P589 184 aaPredicted RBP11.87□□□□□ -0.51
PABPC4-208ENST00000461578 RNF165Q6ZSG1 346 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 C10orf107Q8IVU9 208 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 C17orf53Q8N3J3 647 aaPredicted RBP11.87□□□□□ -0.51
PABPC4-208ENST00000461578 AGR3Q8TD06 166 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 CNOT9Q92600 299 aaKnown RBP11.87□□□□□ -0.51
PABPC4-208ENST00000461578 PMM1Q92871 262 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 RAB8BQ92930 207 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 COQ8BQ96D53 544 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 BOD1Q96IK1 185 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 PPP3R2Q96LZ3 170 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 PRPF18Q99633 342 aaKnown RBP11.87□□□□□ -0.51
PABPC4-208ENST00000461578 DUSP26Q9BV47 211 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 NELFAQ9H3P2 528 aa11.87□□□□□ -0.51
PABPC4-208ENST00000461578 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.87□□□□□ -0.51
PABPC4-208ENST00000461578 PKD1L1Q8TDX9 2849 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 IGHV2OR16-5A0A0B4J2B6 119 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 ZNF208O43345 1280 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 UPK3AO75631 287 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 GPIP06744 558 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 COL8A2P25067 703 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 HTR3AP46098 478 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 KHKP50053 298 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 FUT5Q11128 374 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 SNTB2Q13425 540 aaKnown RBP11.86□□□□□ -0.51
PABPC4-208ENST00000461578 C3orf36Q3SXR2 165 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 ELFN2Q5R3F8 820 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 ATAD3BQ5T9A4 648 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 IL23RQ5VWK5 629 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 TMEM225Q6GV28 225 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 FRRS1Q6ZNA5 592 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 C1orf229Q6ZS94 237 aaPredicted RBP11.86□□□□□ -0.51
PABPC4-208ENST00000461578 USP43Q70EL4 1123 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 NATD1Q8N6N6 113 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 OR51F2Q8NH61 342 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 JMJD8Q96S16 334 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 SF3B5Q9BWJ5 86 aaKnown RBP11.86□□□□□ -0.51
PABPC4-208ENST00000461578 GATA5Q9BWX5 397 aaPredicted RBP11.86□□□□□ -0.51
PABPC4-208ENST00000461578 ADPRHL2Q9NX46 363 aa11.86□□□□□ -0.51
PABPC4-208ENST00000461578 LIPT2A6NK58 231 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 AQP7P3A6NL99 342 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 RIPK2O43353 540 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 LYPLA1O75608 230 aaPredicted RBP11.85□□□□□ -0.51
PABPC4-208ENST00000461578 AVPP01185 164 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 IGKV3-15P01624 115 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 HPXP02790 462 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 CHRNGP07510 517 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 GAAP10253 952 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 PAX7P23759 505 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 LIMS1P48059 325 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 ARFIP2P53365 341 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 ETF1P62495 437 aaKnown RBP11.85□□□□□ -0.51
PABPC4-208ENST00000461578 DAG1Q14118 895 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 UGT3A2Q3SY77 523 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 GPAT3Q53EU6 434 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 OR4F3Q6IEY1 312 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 FNDC5Q8NAU1 212 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 NOA1Q8NC60 698 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms