RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 SLC7A8Q9UHI5 535 aa13.05□□□□□ -0.32
NCKIPSD-207ENST00000453349 EMC9Q9Y3B6 208 aa13.05□□□□□ -0.32
NCKIPSD-207ENST00000453349 MED31Q9Y3C7 131 aa13.05□□□□□ -0.32
NCKIPSD-207ENST00000453349 SPENQ96T58 3664 aaKnown RBP13.05□□□□□ -0.32
NCKIPSD-207ENST00000453349 ARHGAP21Q5T5U3 1957 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 FFAR1O14842 300 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 AKR7A3O95154 331 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 HIST1H2ABP04908 130 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 YES1P07947 543 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 PTNP21246 168 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 BMP5P22003 454 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 CBLP22681 906 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 H3F3AP84243 136 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 FOXF2Q12947 444 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 PDK3Q15120 406 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 TMEM201Q5SNT2 666 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 FAM214BQ7L5A3 538 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 HIST3H2AQ7L7L0 130 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 SPATA24Q86W54 205 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 CCDC103Q8IW40 242 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 CDK20Q8IZL9 346 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 RNF113BQ8IZP6 322 aaKnown RBP13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 TMEM99Q8N816 258 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 ABHD3Q8WU67 409 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 TMEM255BQ8WV15 326 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 HIST1H2ACQ93077 130 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 ZNF426Q9BUY5 554 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 PTDSS2Q9BVG9 487 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 ASPNQ9BXN1 380 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 PIGMQ9H3S5 423 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 NMNAT1Q9HAN9 279 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 GP6Q9HCN6 339 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 KCNJ16Q9NPI9 418 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 CLEC4AQ9UMR7 237 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 PHF3Q92576 2039 aaKnown RBP13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 ESPL1Q14674 2120 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 CFAP46Q8IYW2 2715 aa13.04□□□□□ -0.32
NCKIPSD-207ENST00000453349 DNAJC13O75165 2243 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 A0A1W2PNV4 684 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 HTR3EA5X5Y0 456 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 FTCDNL1E5RQL4 147 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 KPNA4O00629 521 aaPredicted RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 SS18L1O75177 396 aaPredicted RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 CIB2O75838 187 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 DIRAS1O95057 198 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 GADD45GO95257 159 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 MT-ATP6P00846 226 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 BGLAPP02818 100 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 MT-ND1P03886 318 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 H1F0P07305 194 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 RAP2AP10114 183 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 HOXB6P17509 224 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 KIR2DL2P43627 348 aaPredicted RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 SIRPAP78324 504 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 SLC25A35Q3KQZ1 300 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 C1orf146Q5VVC0 180 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 H1FNTQ75WM6 255 aaPredicted RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 MAMDC2Q7Z304 686 aaPredicted RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 PIWIL3Q7Z3Z3 882 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 TSEN54Q7Z6J9 526 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 YTHDF3Q7Z739 585 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 LIX1LQ8IVB5 337 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 TUSC5Q8IXB3 177 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 PIK3C3Q8NEB9 887 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 LRRC46Q96FV0 321 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 PSD2Q9BQI7 771 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 EMC3Q9P0I2 261 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 KLHL13Q9P2N7 655 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 AURKCQ9UQB9 309 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 RASD1Q9Y272 281 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 CORINQ9Y5Q5 1042 aa13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 SMG1Q96Q15 3661 aaKnown RBP13.03□□□□□ -0.32
NCKIPSD-207ENST00000453349 A0A1W2PRQ8 180 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 AQP7P3A6NL99 342 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 ZNF724A8MTY0 619 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 GPR171O14626 319 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 TNFSF13O75888 250 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 SMNDC1O75940 238 aaKnown RBP eCLIP13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 PRSS23O95084 383 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 VAMP5O95183 116 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 CH25HO95992 272 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 IGF2P01344 180 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 NQO1P15559 274 aaKnown RBP13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 KLK2P20151 261 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 GRPRP30550 384 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 UGT2B15P54855 530 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 SPIBQ01892 262 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 LTBQ06643 244 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 PMS2P3Q13401 168 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 DGCR6Q14129 220 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 ZNF730Q6ZMV8 503 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 LSRQ86X29 649 aaPredicted RBP13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 OR6K3Q8NGY3 331 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 ACOT11Q8WXI4 607 aaPredicted RBP13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 SGTBQ96EQ0 304 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 SF3B5Q9BWJ5 86 aaKnown RBP13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 UCK2Q9BZX2 261 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 BCO1Q9HAY6 547 aa13.02□□□□□ -0.33
NCKIPSD-207ENST00000453349 CHST11Q9NPF2 352 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms