RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 C12orf65Q9H3J6 166 aaKnown RBP6.87□□□□□ -1.31
LINC00578-201ENST00000439009 TUBB1Q9H4B7 451 aa6.87□□□□□ -1.31
LINC00578-201ENST00000439009 PIF1Q9H611 641 aa6.87□□□□□ -1.31
LINC00578-201ENST00000439009 SLC7A10Q9NS82 523 aa6.87□□□□□ -1.31
LINC00578-201ENST00000439009 NOP53Q9NZM5 478 aaKnown RBP6.87□□□□□ -1.31
LINC00578-201ENST00000439009 CHRNA9Q9UGM1 479 aa6.87□□□□□ -1.31
LINC00578-201ENST00000439009 TAGLN3Q9UI15 199 aa6.87□□□□□ -1.31
LINC00578-201ENST00000439009 FAF1Q9UNN5 650 aaPredicted RBP6.87□□□□□ -1.31
LINC00578-201ENST00000439009 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
LINC00578-201ENST00000439009 FLVCR1Q9Y5Y0 555 aa6.87□□□□□ -1.31
LINC00578-201ENST00000439009 PTGDR2Q9Y5Y4 395 aa6.87□□□□□ -1.31
LINC00578-201ENST00000439009 SPIN1Q9Y657 262 aaPredicted RBP6.87□□□□□ -1.31
LINC00578-201ENST00000439009 ARFGEF3Q5TH69 2177 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 IGHV1-18A0A0C4DH31 117 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 TMEM89A2RUT3 159 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 LRP5LA4QPB2 252 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 SCAMP2O15127 329 aaKnown RBP6.86□□□□□ -1.31
LINC00578-201ENST00000439009 KCNAB3O43448 404 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 NPHS1O60500 1241 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 FCMRO60667 390 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CRCPO75575 148 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 UGT2B17O75795 530 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 AK1P00568 194 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CSTAP01040 98 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 FGF4P08620 206 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 OR4A8P0C604 315 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 KITP10721 976 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 LAMP1P11279 417 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 EFNA1P20827 205 aaPredicted RBP6.86□□□□□ -1.31
LINC00578-201ENST00000439009 PCMT1P22061 227 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 PRDX6P30041 224 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 IL2RGP31785 369 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 PGM1P36871 562 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 SRP14P37108 136 aaKnown RBP6.86□□□□□ -1.31
LINC00578-201ENST00000439009 RPL3P39023 403 aaKnown RBP6.86□□□□□ -1.31
LINC00578-201ENST00000439009 MAGEA8P43361 318 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 IDH3GP51553 393 aaPredicted RBP6.86□□□□□ -1.31
LINC00578-201ENST00000439009 MAP2K6P52564 334 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CHN2P52757 468 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CDH15P55291 814 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 MXRA7P84157 204 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 RIN1Q13671 783 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 LSM12Q3MHD2 195 aaKnown RBP6.86□□□□□ -1.31
LINC00578-201ENST00000439009 UGT3A2Q3SY77 523 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 SWT1Q5T5J6 900 aaKnown RBP6.86□□□□□ -1.31
LINC00578-201ENST00000439009 TSPO2Q5TGU0 170 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 METTL21CQ5VZV1 264 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CLEC6AQ6EIG7 209 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 EIF3MQ7L2H7 374 aaKnown RBP6.86□□□□□ -1.31
LINC00578-201ENST00000439009 GRINAQ7Z429 371 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 C10orf107Q8IVU9 208 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CCDC103Q8IW40 242 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 ZNF786Q8N393 782 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 TMCO5AQ8N6Q1 288 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 ZIC4Q8N9L1 334 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 NUP37Q8NFH4 326 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 OR7A2PQ8NGA2 310 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CLHC1Q8NHS4 586 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 NEU4Q8WWR8 484 aaPredicted RBP6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CMTM5Q96DZ9 223 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 SLC38A2Q96QD8 506 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 OR7D2Q96RA2 312 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 DOK1Q99704 481 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 ZNF350Q9GZX5 532 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 SAP130Q9H0E3 1048 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 RAB1BQ9H0U4 201 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 C1orf21Q9H246 121 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CTPS2Q9NRF8 586 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CA10Q9NS85 328 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 OXSMQ9NWU1 459 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 TMEM181Q9P2C4 612 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 CRNNQ9UBG3 495 aaPredicted RBP6.86□□□□□ -1.31
LINC00578-201ENST00000439009 METRNQ9UJH8 293 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 SLC9A8Q9Y2E8 581 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 RAP2CQ9Y3L5 183 aa6.86□□□□□ -1.31
LINC00578-201ENST00000439009 ARPC4-TTLL3A0A0A6YYG9 625 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 CENPVL1A0A0U1RR11 272 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 DUXAA6NLW8 204 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 AZIN1O14977 448 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 SLC22A2O15244 555 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 ZNF208O43345 1280 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 STX11O75558 287 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 LYPLA1O75608 230 aaPredicted RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 C6orf47O95873 294 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 IGLV1-44P01699 117 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 IGFBP1P08833 259 aaPredicted RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 LINC00032P0C843 101 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 TFPIP10646 304 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 DAOP14920 347 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 HPCAL1P37235 193 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 CCR4P51679 360 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 RPL38P63173 70 aaKnown RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 SLC35A1P78382 337 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 POU3F1Q03052 451 aaPredicted RBP6.85□□□□□ -1.31
LINC00578-201ENST00000439009 TP53BP2Q13625 1128 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 MAPK14Q16539 360 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 CARTPTQ16568 116 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 ARHGAP11BQ3KRB8 267 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 KANK2Q63ZY3 851 aa6.85□□□□□ -1.31
LINC00578-201ENST00000439009 ANKRD16Q6P6B7 361 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms