RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 SLC38A2Q96QD8 506 aa13.62□□□□□ -0.23
TMEM40-204ENST00000435218 PIGQQ9BRB3 760 aa13.62□□□□□ -0.23
TMEM40-204ENST00000435218 OR11A1Q9GZK7 315 aa13.62□□□□□ -0.23
TMEM40-204ENST00000435218 PLCXD1Q9NUJ7 323 aa13.62□□□□□ -0.23
TMEM40-204ENST00000435218 B4GALT7Q9UBV7 327 aa13.62□□□□□ -0.23
TMEM40-204ENST00000435218 BLOC1S6Q9UL45 172 aa13.62□□□□□ -0.23
TMEM40-204ENST00000435218 PCDHGA9Q9Y5G4 932 aaKnown RBP13.62□□□□□ -0.23
TMEM40-204ENST00000435218 DMXL2Q8TDJ6 3036 aa13.62□□□□□ -0.23
TMEM40-204ENST00000435218 LOC400499M0QZD8 3231 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 SH3D21A4FU49 640 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 PINLYPA6NC86 204 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 SLC1A7O00341 560 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 SURF4O15260 269 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 RRP8O43159 456 aaKnown RBP13.61□□□□□ -0.23
TMEM40-204ENST00000435218 RFPL3SP0C7P2 107 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 CRHBPP24387 322 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 SGCBQ16585 318 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 C1QL3Q5VWW1 255 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 IGFL3Q6UXB1 125 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 PTCHD4Q6ZW05 846 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 FAM26EQ8N5C1 309 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 SCAIQ8N9R8 606 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 ZFP62Q8NB50 900 aaPredicted RBP13.61□□□□□ -0.23
TMEM40-204ENST00000435218 UBE2FQ969M7 185 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 NDEL1Q9GZM8 345 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 ENKD1Q9H0I2 346 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 ADNPQ9H2P0 1102 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 ZNF703Q9H7S9 590 aaPredicted RBP13.61□□□□□ -0.23
TMEM40-204ENST00000435218 RASSF1Q9NS23 344 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 QPCTLQ9NXS2 382 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 MRPL39Q9NYK5 338 aaKnown RBP13.61□□□□□ -0.23
TMEM40-204ENST00000435218 HDGFL3Q9Y3E1 203 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 CORINQ9Y5Q5 1042 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 CACNA1AO00555 2505 aa13.61□□□□□ -0.23
TMEM40-204ENST00000435218 OR2M5A3KFT3 312 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 SHISA8B8ZZ34 492 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 LINC01387J3KSC0 135 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 ARPC3O15145 178 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 GLSO94925 669 aaPredicted RBP13.6□□□□□ -0.23
TMEM40-204ENST00000435218 HIST1H2ABP04908 130 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 HPNP05981 417 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 APEHP13798 732 aaKnown RBP13.6□□□□□ -0.23
TMEM40-204ENST00000435218 IL11P20809 199 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 IDUAP35475 653 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 B3GALT5-AS1P59052 145 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 GABARAPL2P60520 117 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 OCLNQ16625 522 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 ZNF766Q5HY98 468 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 CLEC12AQ5QGZ9 265 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 DPY19L2P2Q6ZN68 376 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 HIST3H2AQ7L7L0 130 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 GALNTL5Q7Z4T8 443 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 NANOGNBQ7Z5D8 188 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 CCDC103Q8IW40 242 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 C10orf53Q8N6V4 93 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 LRRC75AQ8NAA5 344 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 FAM83FQ8NEG4 500 aaPredicted RBP13.6□□□□□ -0.23
TMEM40-204ENST00000435218 OR5J2Q8NH18 312 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 HIST1H2ACQ93077 130 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 ARL5BQ96KC2 179 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 Q96MT0 163 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 HES7Q9BYE0 225 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 FN3KQ9H479 309 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 FANCFQ9NPI8 374 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 NRIP3Q9NQ35 241 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 TVP23BQ9NYZ1 205 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 SLC6A5Q9Y345 797 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 URB1O60287 2271 aaKnown RBP13.6□□□□□ -0.23
TMEM40-204ENST00000435218 MED12Q93074 2177 aa13.6□□□□□ -0.23
TMEM40-204ENST00000435218 MCIDASD6RGH6 385 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 K7ENP7 123 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 IDH3BO43837 385 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 PEPDP12955 493 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 GDF1P27539 372 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
TMEM40-204ENST00000435218 UCNP55089 124 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 RAC1P63000 192 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 FOXK1P85037 733 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 TLE3Q04726 772 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 RAET1LQ5VY80 246 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 MEDAGQ5VYS4 303 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 ARHGAP11AQ6P4F7 1023 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 INO80CQ6PI98 192 aaPredicted RBP13.59□□□□□ -0.23
TMEM40-204ENST00000435218 TCEANCQ8N8B7 351 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 ADPRHL1Q8NDY3 354 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 TMEM163Q8TC26 289 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 TM9SF4Q92544 642 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 UBL7Q96S82 380 aaPredicted RBP13.59□□□□□ -0.23
TMEM40-204ENST00000435218 IFT27Q9BW83 186 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 ASPNQ9BXN1 380 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 TTTY12Q9BZ98 90 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.59□□□□□ -0.23
TMEM40-204ENST00000435218 KLHL1Q9NR64 748 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 CMC2Q9NRP2 79 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 ALKBH4Q9NXW9 302 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 IL20RAQ9UHF4 553 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 TRAPPC4Q9Y296 219 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 PCDHGB7Q9Y5F8 929 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 CELSR3Q9NYQ7 3312 aa13.59□□□□□ -0.23
TMEM40-204ENST00000435218 ANKRD11Q6UB99 2663 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms