RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 TGFBR3Q03167 851 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 RUNDC3AQ59EK9 446 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 SEZ6L2Q6UXD5 910 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 DLEU7Q6UYE1 221 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 KRT73Q86Y46 540 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 ZNF433Q8N7K0 673 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 SPATA3Q8NHX4 192 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 RP9Q8TA86 221 aaKnown RBP13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 WDR60Q8WVS4 1066 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 NEUROG1Q92886 237 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 ZNF775Q96BV0 537 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 DDIT4LQ96D03 193 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 CGREF1Q99674 301 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 NAA11Q9BSU3 229 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 SLC38A1Q9H2H9 487 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 A4GALTQ9NPC4 353 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 CTPS2Q9NRF8 586 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 SLC25A37Q9NYZ2 338 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 MALT1Q9UDY8 824 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 KCNE5Q9UJ90 142 aa13.13□□□□□ -0.31
RPUSD3-208ENST00000433972 PCNX3Q9H6A9 2034 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 PRAMEF27A3QJZ7 478 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 SHISA9B4DS77 424 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 CD5LO43866 347 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 RAD51DO75771 328 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 IGHV4-39P01824 125 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 C1QCP02747 245 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 THBS1P07996 1170 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 CHRM4P08173 479 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 BMP2P12643 396 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 SLC6A2P23975 617 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 RYKP34925 604 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 NUDT6P53370 316 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 GYS2P54840 703 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 FUT5Q11128 374 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 MAPK14Q16539 360 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 LIN52Q52LA3 116 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 REEP3Q6NUK4 255 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 SLC22A25Q6T423 547 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 CLEC2AQ6UVW9 174 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 CXXC5Q7LFL8 322 aaKnown RBP13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 OLIG3Q7RTU3 272 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 ZNF440Q8IYI8 595 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 FBXL14Q8N1E6 418 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 C17orf78Q8N4C9 275 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 OR52P1PQ8NH57 321 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 BBS10Q8TAM1 723 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 ZG16BQ96DA0 208 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 TMEM19Q96HH6 336 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 ANKRD27Q96NW4 1050 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 SPATA5L1Q9BVQ7 753 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 BCL2L10Q9HD36 194 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 CBLN4Q9NTU7 201 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 TMEM181Q9P2C4 612 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 SLC9A8Q9Y2E8 581 aa13.12□□□□□ -0.31
RPUSD3-208ENST00000433972 TRBV5-3A0A0A0MS03 114 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 ZNF716A6NP11 495 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 ZNF208O43345 1280 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 RAMP1O60894 148 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 HOXB9P17482 250 aaPredicted RBP13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 DRD4P21917 467 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 POLR2HP52434 150 aaKnown RBP13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 OR2B6P58173 313 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 SLC35A1P78382 337 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 CDK6Q00534 326 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 RBBP4Q09028 425 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 CYP51A1Q16850 503 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 TRMT5Q32P41 509 aaKnown RBP13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 ZNF544Q6NX49 715 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 PODNL1Q6PEZ8 512 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 ATG4DQ86TL0 474 aaPredicted RBP13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 SNX32Q86XE0 403 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 MSRB3Q8IXL7 192 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 C1orf162Q8NEQ5 155 aaPredicted RBP13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 ZNF524Q96C55 264 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 ZNF607Q96SK3 696 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 DHRS9Q9BPW9 319 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 FKRPQ9H9S5 495 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 UPB1Q9UBR1 384 aa13.11□□□□□ -0.31
RPUSD3-208ENST00000433972 FAAHO00519 579 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 MRASO14807 208 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 SNX3O60493 162 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 ADAM11O75078 769 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 SERPINB7O75635 380 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 ETS2P15036 469 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 PAX7P23759 505 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 CD40P25942 277 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 TTKP33981 857 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 IDH2P48735 452 aaKnown RBP13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 COPZ1P61923 177 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 RAB35Q15286 201 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 ZNF311Q5JNZ3 666 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 CASP12Q6UXS9 341 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 DNM1P46Q6ZS02 220 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 ABHD12BQ7Z5M8 362 aaPredicted RBP13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
RPUSD3-208ENST00000433972 SLC30A8Q8IWU4 369 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms