RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 ULK3Q6PHR2 472 aa14.78□□□□□ -0.04
VRK2-204ENST00000428021 CDH24Q86UP0 819 aa14.78□□□□□ -0.04
VRK2-204ENST00000428021 RBM45Q8IUH3 476 aaKnown RBP14.78□□□□□ -0.04
VRK2-204ENST00000428021 SLC15A3Q8IY34 581 aa14.78□□□□□ -0.04
VRK2-204ENST00000428021 ELOA3Q8NG57 546 aa14.78□□□□□ -0.04
VRK2-204ENST00000428021 OR6T1Q8NGN1 323 aa14.78□□□□□ -0.04
VRK2-204ENST00000428021 SLC38A4Q969I6 547 aa14.78□□□□□ -0.04
VRK2-204ENST00000428021 KTI12Q96EK9 354 aaPredicted RBP14.78□□□□□ -0.04
VRK2-204ENST00000428021 NSRP1Q9H0G5 558 aaKnown RBP14.78□□□□□ -0.04
VRK2-204ENST00000428021 LIME1Q9H400 295 aa14.78□□□□□ -0.04
VRK2-204ENST00000428021 TMEM27Q9HBJ8 222 aa14.78□□□□□ -0.04
VRK2-204ENST00000428021 FANCFQ9NPI8 374 aa14.78□□□□□ -0.04
VRK2-204ENST00000428021 NOSIPQ9Y314 301 aaKnown RBP14.78□□□□□ -0.04
VRK2-204ENST00000428021 FLVCR1Q9Y5Y0 555 aa14.78□□□□□ -0.04
VRK2-204ENST00000428021 A0A087WUJ7 227 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 AQP7P3A6NL99 342 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 FAM220BPB1ANY3 271 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 GPR171O14626 319 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 FMO6PO60774 539 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 AHSA1O95433 338 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 PNMTP11086 282 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 NCALDP61601 193 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 POU4F3Q15319 338 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 TSC22D1Q15714 1073 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 SFRP5Q5T4F7 317 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 Q6ZT83 130 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 PIGWQ7Z7B1 504 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 TSPYL5Q86VY4 417 aaPredicted RBP14.77□□□□□ -0.05
VRK2-204ENST00000428021 ZNF100Q8IYN0 542 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 ZIC4Q8N9L1 334 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 MFSD8Q8NHS3 518 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 TAAR8Q969N4 342 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 SLC47A1Q96FL8 570 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 ZC3HAV1LQ96H79 300 aaKnown RBP14.77□□□□□ -0.05
VRK2-204ENST00000428021 MCHR1Q99705 422 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 TAPBPLQ9BX59 468 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 ACTR6Q9GZN1 396 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 OR10A4Q9H209 315 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 ADPRHL2Q9NX46 363 aa14.77□□□□□ -0.05
VRK2-204ENST00000428021 C6orf203Q9P0P8 240 aaPredicted RBP14.77□□□□□ -0.05
VRK2-204ENST00000428021 LYPD3O95274 346 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 THY1P04216 161 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 PPP3CBP16298 524 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 LOXP28300 417 aaPredicted RBP14.76□□□□□ -0.05
VRK2-204ENST00000428021 RPS5P46782 204 aaKnown RBP14.76□□□□□ -0.05
VRK2-204ENST00000428021 CDH12P55289 794 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 P2RY6Q15077 328 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 LINC00114Q6XXX2 140 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 HACD2Q6Y1H2 254 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 RANBP3LQ86VV4 465 aaPredicted RBP14.76□□□□□ -0.05
VRK2-204ENST00000428021 P3H2Q8IVL5 708 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 OR2T12Q8NG77 320 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 OR9K2Q8NGE7 335 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 SLC26A7Q8TE54 656 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 S100PBPQ96BU1 408 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 SF3B5Q9BWJ5 86 aaKnown RBP14.76□□□□□ -0.05
VRK2-204ENST00000428021 HDHD5Q9BXW7 423 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 PLEKHF2Q9H8W4 249 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 EFCAB1Q9HAE3 211 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 ZNF226Q9NYT6 803 aa14.76□□□□□ -0.05
VRK2-204ENST00000428021 KLF4O43474 513 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 CNOT4O95628 575 aaKnown RBP14.75□□□□□ -0.05
VRK2-204ENST00000428021 IGHV3-9P01782 118 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 COX5AP20674 150 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 IGHV1-2P23083 117 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 PRDX6P30041 224 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 DNAJA1P31689 397 aaKnown RBP14.75□□□□□ -0.05
VRK2-204ENST00000428021 ITGADQ13349 1161 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 ZNF613Q6PF04 617 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 ARPINQ7Z6K5 226 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 MICU2Q8IYU8 434 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 STEAP2Q8NFT2 490 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 VANGL1Q8TAA9 524 aaPredicted RBP14.75□□□□□ -0.05
VRK2-204ENST00000428021 RASSF5Q8WWW0 418 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 APH1AQ96BI3 265 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 SLC25A36Q96CQ1 311 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 CMTM5Q96DZ9 223 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 ZNF385AQ96PM9 386 aaKnown RBP14.75□□□□□ -0.05
VRK2-204ENST00000428021 HOPXQ9BPY8 73 aaPredicted RBP14.75□□□□□ -0.05
VRK2-204ENST00000428021 PCDHAC1Q9H158 963 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 SEC14L4Q9UDX3 406 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 AP3M1Q9Y2T2 418 aa14.75□□□□□ -0.05
VRK2-204ENST00000428021 TRAV36DV7A0A075B6V5 113 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 ELOVL7A1L3X0 281 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 NME4O00746 187 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 MRPL33O75394 65 aaKnown RBP14.74□□□□□ -0.05
VRK2-204ENST00000428021 KDELR2P33947 212 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 NUDT2P50583 147 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 SLC7A2P52569 658 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 LIPEQ05469 1076 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 LTBQ06643 244 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 ENTPD8Q5MY95 495 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 SWT1Q5T5J6 900 aaKnown RBP14.74□□□□□ -0.05
VRK2-204ENST00000428021 FAM69AQ5T7M9 428 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 FBXW9Q5XUX1 488 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 FBXW10Q5XX13 1052 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 TMEM225Q6GV28 225 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 C5orf46Q6UWT4 87 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 WDR88Q6ZMY6 472 aa14.74□□□□□ -0.05
VRK2-204ENST00000428021 ADAMTS16Q8TE57 1224 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms