RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 CCDC103Q8IW40 242 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 DEPDC4Q8N2C3 294 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 TMEM178AQ8NBL3 297 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 FBLIM1Q8WUP2 373 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 APH1BQ8WW43 257 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 OR5B2Q96R09 309 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 NR1H4Q96RI1 486 aaPredicted RBP10.88□□□□□ -0.67
RFC4-206ENST00000427785 IL4I1Q96RQ9 567 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 SMAD5Q99717 465 aaKnown RBP10.88□□□□□ -0.67
RFC4-206ENST00000427785 IFT27Q9BW83 186 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 FKRPQ9H9S5 495 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 SERINC1Q9NRX5 453 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 IL20Q9NYY1 176 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 TVP23BQ9NYZ1 205 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 ZNF229Q9UJW7 825 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 SPIN1Q9Y657 262 aaPredicted RBP10.88□□□□□ -0.67
RFC4-206ENST00000427785 CELSR3Q9NYQ7 3312 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 CACNA1AO00555 2505 aa10.88□□□□□ -0.67
RFC4-206ENST00000427785 SVILO95425 2214 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 A0A1W2PNR3 127 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 FTCDNL1E5RQL4 147 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 K7ENP7 123 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 M0R082 166 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 BHLHE40O14503 412 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 CDK2AP1O14519 115 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 PRKYO43930 277 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 PTP4A3O75365 173 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 WBP4O75554 376 aaKnown RBP10.87□□□□□ -0.67
RFC4-206ENST00000427785 NDUFB2O95178 105 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 MT-ATP6P00846 226 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 PDGFAP04085 211 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 LYNP07948 512 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 ASAH2BP0C7U1 165 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 IMPDH2P12268 514 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 BMP7P18075 431 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 ADH6P28332 368 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 SLC6A6P31641 620 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 UQCRC1P31930 480 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 RPL4P36578 427 aaKnown RBP10.87□□□□□ -0.67
RFC4-206ENST00000427785 AQP2P41181 271 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 MAGEA5P43359 124 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 GIPRP48546 466 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 RPS6KA3P51812 740 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 TMPRSS3P57727 454 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 RPL18Q07020 188 aaKnown RBP10.87□□□□□ -0.67
RFC4-206ENST00000427785 MYBPHQ13203 477 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 TOP3AQ13472 1001 aaPredicted RBP10.87□□□□□ -0.67
RFC4-206ENST00000427785 SMN1Q16637 294 aaKnown RBP10.87□□□□□ -0.67
RFC4-206ENST00000427785 INO80CQ6PI98 192 aaPredicted RBP10.87□□□□□ -0.67
RFC4-206ENST00000427785 LRRC69Q6ZNQ3 347 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 MAMDC2Q7Z304 686 aaPredicted RBP10.87□□□□□ -0.67
RFC4-206ENST00000427785 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.87□□□□□ -0.67
RFC4-206ENST00000427785 TMEM251Q8N6I4 163 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 TCEANCQ8N8B7 351 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 OR2T33Q8NG76 320 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 ZNF417Q8TAU3 575 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 SLC25A43Q8WUT9 341 aaPredicted RBP10.87□□□□□ -0.67
RFC4-206ENST00000427785 SFXN2Q96NB2 322 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 ZNF587Q96SQ5 575 aaPredicted RBP10.87□□□□□ -0.67
RFC4-206ENST00000427785 PIGQQ9BRB3 760 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 SLC6A15Q9H2J7 730 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 DNAJC27Q9NZQ0 273 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 GPR52Q9Y2T5 361 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 HSPE1-MOB4S4R3N1 261 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 ALPK2Q86TB3 2170 aa10.87□□□□□ -0.67
RFC4-206ENST00000427785 TRAV17A0A0B4J275 112 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 MED19A0JLT2 244 aaPredicted RBP10.86□□□□□ -0.67
RFC4-206ENST00000427785 HTR3EA5X5Y0 456 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 LIPT2A6NK58 231 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 C11orf98E9PRG8 122 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 BLOC1S5-TXNDC5H3BN57 136 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 KLRC4-KLRK1H3BQV0 150 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 K7EM74 188 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 SLC1A7O00341 560 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 SERPINI2O75830 405 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 GLSO94925 669 aaPredicted RBP10.86□□□□□ -0.67
RFC4-206ENST00000427785 TNFAIP8O95379 198 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 SLC2A10O95528 541 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 GABRB1P18505 474 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 GTF2E2P29084 291 aaKnown RBP10.86□□□□□ -0.67
RFC4-206ENST00000427785 GRK5P34947 590 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 PCYT1AP49585 367 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 NUDT6P53370 316 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 CDK5R2Q13319 367 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 SNAPC1Q16533 368 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 TMEM176BQ3YBM2 270 aaPredicted RBP10.86□□□□□ -0.67
RFC4-206ENST00000427785 GLYR1Q49A26 553 aaPredicted RBP10.86□□□□□ -0.67
RFC4-206ENST00000427785 SLC35F1Q5T1Q4 408 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 BORAQ6PGQ7 559 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 UNQ6494/PRO21346Q6UXR6 183 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 PTCHD4Q6ZW05 846 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 BCDIN3DQ7Z5W3 292 aaKnown RBP10.86□□□□□ -0.67
RFC4-206ENST00000427785 LSM14AQ8ND56 463 aaKnown RBP10.86□□□□□ -0.67
RFC4-206ENST00000427785 OR5J2Q8NH18 312 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 LIPHQ8WWY8 451 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 ZCCHC14Q8WYQ9 949 aaKnown RBP10.86□□□□□ -0.67
RFC4-206ENST00000427785 DTNBP1Q96EV8 351 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 SLC38A2Q96QD8 506 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 RHNO1Q9BSD3 238 aa10.86□□□□□ -0.67
RFC4-206ENST00000427785 KATNB1Q9BVA0 655 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms