RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CXorf67Q86X51 503 aaPredicted RBP9.71□□□□□ -0.86
USP49-204ENST00000423567 CDC20BQ86Y33 519 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 CCDC103Q8IW40 242 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 POU5F2Q8N7G0 328 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 KISS1RQ969F8 398 aaPredicted RBP9.71□□□□□ -0.86
USP49-204ENST00000423567 SLC38A4Q969I6 547 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 SLC25A36Q96CQ1 311 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 SLC47A1Q96FL8 570 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 EPYCQ99645 322 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 SF3B5Q9BWJ5 86 aaKnown RBP9.71□□□□□ -0.86
USP49-204ENST00000423567 ACTR6Q9GZN1 396 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 EFCAB1Q9HAE3 211 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 C6orf203Q9P0P8 240 aaPredicted RBP9.71□□□□□ -0.86
USP49-204ENST00000423567 ING1Q9UK53 422 aaPredicted RBP9.71□□□□□ -0.86
USP49-204ENST00000423567 ITGB1BP2Q9UKP3 347 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 SLC9A8Q9Y2E8 581 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 AQP7P3A6NL99 342 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 TMEM229AB2RXF0 380 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 AIM2O14862 343 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 SIAH2O43255 324 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 FMO6PO60774 539 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 GCM2O75603 506 aaPredicted RBP9.7□□□□□ -0.86
USP49-204ENST00000423567 AKR7A3O95154 331 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 LGI1O95970 557 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 HRGP04196 525 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 HTR2AP28223 471 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 RPS5P46782 204 aaKnown RBP9.7□□□□□ -0.86
USP49-204ENST00000423567 ITGADQ13349 1161 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 VEZF1Q14119 521 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 OR1Q1Q15612 314 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 SFRP5Q5T4F7 317 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 C6orf89Q6UWU4 347 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 CASP12Q6UXS9 341 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 GPAT4Q86UL3 456 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 GABRG1Q8N1C3 465 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 TMEM99Q8N816 258 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 OR2T12Q8NG77 320 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 MFSD8Q8NHS3 518 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 PROX1Q92786 737 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 TAMM41Q96BW9 452 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 CMTM5Q96DZ9 223 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 PIK3IP1Q96FE7 263 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 MCHR1Q99705 422 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 ARHGDIGQ99819 225 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 HOPXQ9BPY8 73 aaPredicted RBP9.7□□□□□ -0.86
USP49-204ENST00000423567 NGBQ9NPG2 151 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 BAG5Q9UL15 447 aa9.7□□□□□ -0.86
USP49-204ENST00000423567 TEX15Q9BXT5 2789 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 TRAV36DV7A0A075B6V5 113 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 A0A0B4J2E0 115 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 A0A1B0GX12 115 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 FAM220BPB1ANY3 271 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 ZNF814B7Z6K7 855 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 M0R3H8 397 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 NDUFAB1O14561 156 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 SNX3O60493 162 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 RAMP1O60894 148 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 NPIPB7O75200 414 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 F12P00748 615 aaPredicted RBP9.69□□□□□ -0.86
USP49-204ENST00000423567 CD247P20963 164 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 DNASE1P24855 282 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 GZMMP51124 257 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 MFSD13AQ14CX5 517 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 NRF1Q16656 503 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 DUSP7Q16829 419 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 BEX5Q5H9J7 111 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 FAM69AQ5T7M9 428 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 FBXW9Q5XUX1 488 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 ALKBH2Q6NS38 261 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 ZNF613Q6PF04 617 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 CCDC80Q76M96 950 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 BHLHA15Q7RTS1 189 aaPredicted RBP9.69□□□□□ -0.86
USP49-204ENST00000423567 SSX8Q7RTT4 187 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.69□□□□□ -0.86
USP49-204ENST00000423567 COMTD1Q86VU5 262 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 CALHM3Q86XJ0 350 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 WFDC8Q8IUA0 241 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 OR9K2Q8NGE7 335 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 VANGL1Q8TAA9 524 aaPredicted RBP9.69□□□□□ -0.86
USP49-204ENST00000423567 HSD17B8Q92506 261 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 NINJ1Q92982 152 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 S100PBPQ96BU1 408 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 ZNF583Q96ND8 569 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 UPB1Q9UBR1 384 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 PRSS50Q9UI38 385 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 RASD1Q9Y272 281 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 FLVCR1Q9Y5Y0 555 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 APCP25054 2843 aa9.69□□□□□ -0.86
USP49-204ENST00000423567 A0A087WUJ7 227 aa9.68□□□□□ -0.86
USP49-204ENST00000423567 CIB4A0PJX0 185 aa9.68□□□□□ -0.86
USP49-204ENST00000423567 ELOVL7A1L3X0 281 aa9.68□□□□□ -0.86
USP49-204ENST00000423567 CCT8L1PA6NM43 557 aa9.68□□□□□ -0.86
USP49-204ENST00000423567 CPSF4LA6NMK7 179 aaKnown RBP9.68□□□□□ -0.86
USP49-204ENST00000423567 GSTA4O15217 222 aa9.68□□□□□ -0.86
USP49-204ENST00000423567 LYZL6O75951 148 aa9.68□□□□□ -0.86
USP49-204ENST00000423567 KRT33AO76009 404 aa9.68□□□□□ -0.86
USP49-204ENST00000423567 IGHV3-9P01782 118 aa9.68□□□□□ -0.86
USP49-204ENST00000423567 GGT1P19440 569 aa9.68□□□□□ -0.86
USP49-204ENST00000423567 DRD4P21917 467 aa9.68□□□□□ -0.86
USP49-204ENST00000423567 PRDX6P30041 224 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms