RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 TMEM99Q8N816 258 aa23.38■■□□□ 1.33
CDK9-202ENST00000421939 SLC26A7Q8TE54 656 aa23.38■■□□□ 1.33
CDK9-202ENST00000421939 KISS1RQ969F8 398 aaPredicted RBP23.38■■□□□ 1.33
CDK9-202ENST00000421939 APH1AQ96BI3 265 aa23.38■■□□□ 1.33
CDK9-202ENST00000421939 SELENONQ9NZV5 590 aa23.38■■□□□ 1.33
CDK9-202ENST00000421939 SLC9A8Q9Y2E8 581 aa23.38■■□□□ 1.33
CDK9-202ENST00000421939 FLVCR1Q9Y5Y0 555 aa23.38■■□□□ 1.33
CDK9-202ENST00000421939 A0A0B4J2E0 115 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 A0A1B0GX12 115 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 TPST2O60704 377 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 CNOT4O95628 575 aaKnown RBP23.37■■□□□ 1.33
CDK9-202ENST00000421939 CD247P20963 164 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 CRYBA2P53672 197 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 GYS2P54840 703 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 TSC22D1Q15714 1073 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 TREML1Q86YW5 311 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 S100PBPQ96BU1 408 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 SLC47A1Q96FL8 570 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 ZNF583Q96ND8 569 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 PTDSS2Q9BVG9 487 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 ITGB1BP2Q9UKP3 347 aa23.37■■□□□ 1.33
CDK9-202ENST00000421939 FAM220BPB1ANY3 271 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 SNX3O60493 162 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 FMO6PO60774 539 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 MRPL33O75394 65 aaKnown RBP23.36■■□□□ 1.33
CDK9-202ENST00000421939 GNGT1P63211 74 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 ITGADQ13349 1161 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 VEZF1Q14119 521 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 C5orf46Q6UWT4 87 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 CASP12Q6UXS9 341 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 ARPINQ7Z6K5 226 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 OR9K2Q8NGE7 335 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 MFSD8Q8NHS3 518 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 RNF217Q8TC41 542 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 RASSF5Q8WWW0 418 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 SLC38A4Q969I6 547 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 KTI12Q96EK9 354 aaPredicted RBP23.36■■□□□ 1.33
CDK9-202ENST00000421939 PIK3IP1Q96FE7 263 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 MCHR1Q99705 422 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 SF3B5Q9BWJ5 86 aaKnown RBP23.36■■□□□ 1.33
CDK9-202ENST00000421939 LIME1Q9H400 295 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 ST6GALNAC2Q9UJ37 374 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 USP22Q9UPT9 525 aa23.36■■□□□ 1.33
CDK9-202ENST00000421939 IGKV1D-42A0A075B6H8 117 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 A0A1W2PPR1 153 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 GMNCA6NCL1 334 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 FTCDNL1E5RQL4 147 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 DYNC1I1O14576 645 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 AIM2O14862 343 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 COX5AP20674 150 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 NTF4P34130 210 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 RPS5P46782 204 aaKnown RBP23.35■■□□□ 1.33
CDK9-202ENST00000421939 NPTX1Q15818 432 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 SWT1Q5T5J6 900 aaKnown RBP23.35■■□□□ 1.33
CDK9-202ENST00000421939 FBXW9Q5XUX1 488 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 CPLX4Q7Z7G2 160 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 OR6T1Q8NGN1 323 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 PLEKHF2Q9H8W4 249 aa23.35■■□□□ 1.33
CDK9-202ENST00000421939 A0A087WUJ7 227 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 CCT8L1PA6NM43 557 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 IGHV3-9P01782 118 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 GTF2E2P29084 291 aaKnown RBP23.34■■□□□ 1.33
CDK9-202ENST00000421939 P2RY4P51582 365 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 ZNF613Q6PF04 617 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 PAMR1Q6UXH9 720 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 BHLHA15Q7RTS1 189 aaPredicted RBP23.34■■□□□ 1.33
CDK9-202ENST00000421939 GPAT4Q86UL3 456 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 WFDC8Q8IUA0 241 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 UBE2J2Q8N2K1 259 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 OR2T12Q8NG77 320 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 VANGL1Q8TAA9 524 aaPredicted RBP23.34■■□□□ 1.33
CDK9-202ENST00000421939 NINJ1Q92982 152 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 SLC25A36Q96CQ1 311 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 USB1Q9BQ65 265 aaKnown RBP23.34■■□□□ 1.33
CDK9-202ENST00000421939 MYLK2Q9H1R3 596 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 PARPBPQ9NWS1 579 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 MALT1Q9UDY8 824 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 AP3M1Q9Y2T2 418 aa23.34■■□□□ 1.33
CDK9-202ENST00000421939 TRAV36DV7A0A075B6V5 113 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 FZD7O75084 574 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 LYZL6O75951 148 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 VAMP5O95183 116 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 IGHV1-2P23083 117 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 CDH12P55289 794 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 BEX5Q5H9J7 111 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 FAM69AQ5T7M9 428 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 TMEM225Q6GV28 225 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 P3H2Q8IVL5 708 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 OR4D11Q8NGI4 311 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 TMEM45BQ96B21 275 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 CMTM6Q9NX76 183 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 EDARQ9UNE0 448 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 PLEKHA6Q9Y2H5 1048 aa23.33■■□□□ 1.33
CDK9-202ENST00000421939 CELSR1Q9NYQ6 3014 aa23.32■■□□□ 1.32
CDK9-202ENST00000421939 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.32■■□□□ 1.32
CDK9-202ENST00000421939 OR2T1O43869 369 aa23.32■■□□□ 1.32
CDK9-202ENST00000421939 LOXP28300 417 aaPredicted RBP23.32■■□□□ 1.32
CDK9-202ENST00000421939 RBM45Q8IUH3 476 aaKnown RBP23.32■■□□□ 1.32
CDK9-202ENST00000421939 PROX1Q92786 737 aa23.32■■□□□ 1.32
CDK9-202ENST00000421939 TAAR8Q969N4 342 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms