RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 RAC1P63000 192 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 FOXK2Q01167 660 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 LTBQ06643 244 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 PMS2P3Q13401 168 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 SYT14P1Q58G82 188 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 ALG10Q5BKT4 473 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 ZNF766Q5HY98 468 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 ARHGAP11AQ6P4F7 1023 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 IGFL2Q6UWQ7 119 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 CCDC71Q8IV32 467 aaPredicted RBP12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 ZADH2Q8N4Q0 377 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 LRRC17Q8N6Y2 441 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 TMEM163Q8TC26 289 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 UBE2FQ969M7 185 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 MOGAT1Q96PD6 335 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 IL4I1Q96RQ9 567 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 MRPS26Q9BYN8 205 aaKnown RBP12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 FN3KQ9H479 309 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 CCNB1IP1Q9NPC3 277 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 KLHL1Q9NR64 748 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 DEPPQ9NTK1 212 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 KLHL21Q9UJP4 597 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 TRAPPC4Q9Y296 219 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 RPH3AQ9Y2J0 694 aaPredicted RBP12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 MPDZO75970 2070 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 ZC3H12DA2A288 527 aaKnown RBP12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 RIIAD1A6NNX1 92 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 H3BML4 177 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 ACOT7O00154 380 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 BHLHE40O14503 412 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 IMPA2O14732 288 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 SURF4O15260 269 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 MRPS14O60783 128 aaKnown RBP12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 SMNDC1O75940 238 aaKnown RBP eCLIP12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 PEPDP12955 493 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 GABRB1P18505 474 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 TCEA1P23193 301 aaKnown RBP12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 CRHBPP24387 322 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 GRPRP30550 384 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 FMO3P31513 532 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 UCNP55089 124 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 RPS4XP62701 263 aaKnown RBP12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 SGCBQ16585 318 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 TMEM176BQ3YBM2 270 aaPredicted RBP12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 PDSS1Q5T2R2 415 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 SLC6A19Q695T7 634 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 GALNTL5Q7Z4T8 443 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 SCAIQ8N9R8 606 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 ZNF540Q8NDQ6 660 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 OR4Q3Q8NH05 313 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 RFKQ969G6 155 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 MYDGFQ969H8 173 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 SCMH1Q96GD3 660 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 ERMAPQ96PL5 475 aaPredicted RBP12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 SMAD5Q99717 465 aaKnown RBP12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 PTDSS2Q9BVG9 487 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 OR2B2Q9GZK3 357 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 OR11A1Q9GZK7 315 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 BATF3Q9NR55 127 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 QPCTLQ9NXS2 382 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 IL20RAQ9UHF4 553 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 SSUH2Q9Y2M2 353 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 RPL36Q9Y3U8 105 aaKnown RBP12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 HRH3Q9Y5N1 445 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 IER3IP1Q9Y5U9 82 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 SNX5Q9Y5X3 404 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 MED13Q9UHV7 2174 aa12.87□□□□□ -0.35
HMGA1P1-201ENST00000415560 TRAV17A0A0B4J275 112 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 IRGMA1A4Y4 181 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 OR2M5A3KFT3 312 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 LRRC3CA6NJW4 275 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 SHISA8B8ZZ34 492 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 PTGES3LE9PB15 166 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 ARPC3O15145 178 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 RNF13O43567 381 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 EFNA2O43921 213 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 WBP4O75554 376 aaKnown RBP12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 PPP1R3DO95685 299 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 CLPTM1O96005 669 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 CD14P08571 375 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 ADRB1P08588 477 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 ADORA3P0DMS8 318 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 APEHP13798 732 aaKnown RBP12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 PAICSP22234 425 aaKnown RBP12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 AQP2P41181 271 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 MEOX1P50221 254 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 TNFSF10P50591 281 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 FXYD6P3P58550 94 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 CTXN1P60606 82 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 TUBA4AP68366 448 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 CSNK2A1P68400 391 aaPredicted RBP12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 SLC35A1P78382 337 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 ZP4Q12836 540 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 OR7A5Q15622 319 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 EMC4Q5J8M3 183 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 TMEM201Q5SNT2 666 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 C1QL3Q5VWW1 255 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 GPR139Q6DWJ6 353 aa12.86□□□□□ -0.35
HMGA1P1-201ENST00000415560 THSD4Q6ZMP0 1018 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms