RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 HAGHLQ6PII5 290 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 XKR5Q6UX68 686 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 GPR137CQ8N3F9 429 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 BCORP1Q8N888 145 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 TMEM203Q969S6 136 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF501Q96CX3 271 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 PIGQQ9BRB3 760 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF337Q9Y3M9 751 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 HSPB11Q9Y547 144 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 TTC28Q96AY4 2481 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 CACNA1IQ9P0X4 2223 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ANAPC1Q9H1A4 1944 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 CNOT1A5YKK6 2376 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 DOCK8Q8NF50 2099 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 RANBP2P49792 3224 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ISPDA4D126 451 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 H3BML4 177 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PRAMEF4O60810 478 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 ALPLP05186 524 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 FTH1P19P0C7X4 201 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 SLC15A1P46059 708 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 DAP3P51398 398 aaKnown RBP7.85□□□□□ -1.15
SYNE1-211ENST00000413186 AIMP2Q13155 320 aaKnown RBP7.85□□□□□ -1.15
SYNE1-211ENST00000413186 GXYLT1Q4G148 440 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PRAMEF17Q5VTA0 474 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PRAMEF9Q5VWM5 478 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PLET1Q6UQ28 207 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PRSS41Q7RTY9 318 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 SFTPA2Q8IWL1 248 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 DIRAS2Q96HU8 199 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 SP140LQ9H930 580 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 P4HTMQ9NXG6 502 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CORINQ9Y5Q5 1042 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CACNA1HO95180 2353 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 A0A0A6YYH2 397 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 A6NJ64 397 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 WASHC1A8K0Z3 465 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 TSTD3H0UI37 97 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 GFRA3O60609 400 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 ARL6IP5O75915 188 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CLIC3O95833 236 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PEPDP12955 493 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 MMP11P24347 488 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PCBP4P57723 403 aaKnown RBP7.85□□□□□ -1.15
SYNE1-211ENST00000413186 AP3S2P59780 193 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 ST3GAL4Q11206 333 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CDK5R2Q13319 367 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 ALG10Q5BKT4 473 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 DPPA2Q7Z7J5 298 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 SIRT6Q8N6T7 355 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 TM4SF19Q96DZ7 209 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 WWTR1Q9GZV5 400 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 NXF5Q9H1B4 397 aaKnown RBP7.85□□□□□ -1.15
SYNE1-211ENST00000413186 AMBNQ9NP70 447 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CNOT2Q9NZN8 540 aaKnown RBP7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CNIH4Q9P003 139 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PILRAQ9UKJ1 303 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CCL27Q9Y4X3 112 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PCDHGA10Q9Y5H3 936 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 B3GALT1Q9Y5Z6 326 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CHD5Q8TDI0 1954 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 TEX51A0A1B0GUA7 166 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 SLC35F4A4IF30 521 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CENPBD1B2RD01 187 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CCNKO75909 580 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 NKX2-2O95096 273 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 DHFRP00374 187 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 APOA2P02652 100 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PTNP21246 168 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 P2RX1P51575 399 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PITPNAQ00169 270 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 DEFA6Q01524 100 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PUM1Q14671 1186 aaKnown RBP eCLIP7.85□□□□□ -1.15
SYNE1-211ENST00000413186 AKR1C8PQ5T2L2 129 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 ARTNQ5T4W7 220 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PLEKHG7Q6ZR37 379 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 SLC22A16Q86VW1 577 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 LILRA2Q8N149 483 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 OIT3Q8WWZ8 545 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 FRZBQ92765 325 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 SMIM12Q96EX1 92 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 DDA1Q9BW61 102 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PLEKHA1Q9HB21 404 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CENPMQ9NSP4 180 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PCDHGB6Q9Y5F9 930 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 ALG5Q9Y673 324 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 AGAP5A6NIR3 686 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 KLK10O43240 276 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 ENTPD6O75354 484 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 LGI1O95970 557 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 TFPTP0C1Z6 253 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 FGF5P12034 268 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 LSSP48449 732 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 RIPPLY1Q0D2K3 151 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 TATDN3Q17R31 274 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF674Q2M3X9 581 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 ANKDD1AQ495B1 522 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 PODNL1Q6PEZ8 512 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 GRINAQ7Z429 371 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms