RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 NEUROG3Q9Y4Z2 214 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TMEM184BQ9Y519 407 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 FKBP7Q9Y680 259 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ACACBO00763 2458 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 LAMA5O15230 3695 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PTPRBP23467 1997 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TPRP12270 2363 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 CFAP47Q6ZTR5 3102 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 IGHV5-10-1A0A0J9YXX1 117 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 MYOCOSA0A1B0GUC4 107 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 SLC5A10A0PJK1 596 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 OR6C74A6NCV1 312 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 TRABD2BA6NFA1 517 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 HELTA6NFD8 242 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 LILRA5A6NI73 299 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CBY3A6NI87 242 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 MPTX1A8MV57 137 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 C2orf74A8MZ97 194 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 HSBP1L1C9JCN9 74 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 E7ESA3 106 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 TMX2-CTNND1H3BSU7 103 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CLDN4O14493 209 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 TFECO14948 347 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ANKRD28O15084 1053 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ARHGEF9O43307 516 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 DUX1O43812 170 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 AKAP8O43823 692 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 VPS26AO75436 327 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ERN1O75460 977 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CREG1O75629 220 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 PDE9AO76083 593 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 AP2A2O94973 939 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 SEMA3DO95025 777 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 IGHV2-70P01814 119 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CRYABP02511 175 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 FTH1P02794 183 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 FABP1P07148 127 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 PROS1P07225 676 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ALDOCP09972 364 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 HSMCR30P0CW71 290 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 PRF1P14222 555 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 HOXB9P17482 250 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 XRCC1P18887 633 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 RAB4AP20338 218 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ZP3P21754 424 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 MATN1P21941 496 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CPN2P22792 545 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 RPS3P23396 243 aaKnown RBP eCLIP4.17□□□□□ -1.747e-8■□□□□ 8.6
SF3B1-202ENST00000409915 CD1CP29017 333 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 SSTR1P30872 391 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CD96P40200 585 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ETV5P41161 510 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ETV6P41212 452 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 BDKRB1P46663 353 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CAPZBP47756 277 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 SLC37A1P57057 533 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ADAM8P78325 824 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 TGM3Q08188 693 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 GPR50Q13585 617 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 DNASE1L3Q13609 305 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF169Q14929 603 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 DECR1Q16698 335 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 FAM214AQ32MH5 1076 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 SPATS1Q496A3 300 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 GAGE13Q4V321 117 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CLLU1Q5K131 121 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 SPANXN3Q5MJ09 141 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 PHYHD1Q5SRE7 291 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CCNYL2Q5T2Q4 361 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 C6orf52Q5T4I8 152 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 DCAF12L2Q5VW00 463 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 GPR107Q5VW38 600 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 LYPLAL1Q5VWZ2 237 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 PRAMEF7Q5VXH5 474 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 STEAP4Q687X5 459 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 NCR3LG1Q68D85 454 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 TYW3Q6IPR3 259 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF549Q6P9A3 640 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF773Q6PK81 442 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 WASH2PQ6VEQ5 465 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 RPTNQ6XPR3 784 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CERS6Q6ZMG9 384 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 QSOX2Q6ZRP7 698 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 FAM92BQ6ZTR7 304 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 BIVMQ86UB2 503 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 TMPRSS12Q86WS5 348 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 MISPQ8IVT2 679 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 LRRC56Q8IYG6 542 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ZDHHC23Q8IYP9 409 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ADGRF3Q8IZF5 1079 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 DSELQ8IZU8 1212 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CLEC4FQ8N1N0 589 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 EIF4E3Q8N5X7 224 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ANKFN1Q8N957 763 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 SIDT2Q8NBJ9 832 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ACVR1CQ8NER5 493 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 BBS1Q8NFJ9 593 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 SKA2Q8WVK7 121 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ASZ1Q8WWH4 475 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms