RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CDH10Q9Y6N8 788 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 BLACEA4D250 179 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 KLRC4-KLRK1H3BQV0 150 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 RAB36O95755 333 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 MT-ND5P03915 603 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 ZNF26P17031 533 aaPredicted RBP10.42□□□□□ -0.74
SNX13-202ENST00000409604 RAB39AQ14964 217 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 ASB18Q6ZVZ8 466 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 GALNT15Q8N3T1 639 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 TFAP2CQ92754 450 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 PNPLA2Q96AD5 504 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 SPACA9Q96E40 222 aaPredicted RBP10.42□□□□□ -0.74
SNX13-202ENST00000409604 SYNPO2LQ9H987 977 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 ZC4H2Q9NQZ6 224 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 PCDHGA5Q9Y5G8 931 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 A0A1W2PR80 420 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 ATP1B1P05026 303 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 ENDOUP21128 410 aaKnown RBP10.42□□□□□ -0.74
SNX13-202ENST00000409604 EIF2S3P41091 472 aaKnown RBP10.42□□□□□ -0.74
SNX13-202ENST00000409604 PGGHGQ32M88 737 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 ZNF628Q5EBL2 1059 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 PGBD2Q6P3X8 592 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 TMEM99Q8N816 258 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 OR11G2Q8NGC1 345 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 OR2Y1Q8NGV0 311 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 LMF2Q9BU23 707 aaKnown RBP10.42□□□□□ -0.74
SNX13-202ENST00000409604 C20orf141Q9NUB4 165 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 FOXJ2Q9P0K8 574 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 CADP27708 2225 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 SERPINA3P01011 423 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 TTKP33981 857 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 RCVRNP35243 200 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 POLR2HP52434 150 aaKnown RBP10.42□□□□□ -0.74
SNX13-202ENST00000409604 CXADRP78310 365 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 EIF2B1Q14232 305 aaKnown RBP10.42□□□□□ -0.74
SNX13-202ENST00000409604 MTFR2Q6P444 385 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 C11orf88Q6PI97 169 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 GALNT16Q8N428 558 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 BHLHE23Q8NDY6 225 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 PTPMT1Q8WUK0 201 aaPredicted RBP10.42□□□□□ -0.74
SNX13-202ENST00000409604 UBQLN3Q9H347 655 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 WDR76Q9H967 626 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 TMEM45AQ9NWC5 275 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 CHRNA9Q9UGM1 479 aa10.42□□□□□ -0.74
SNX13-202ENST00000409604 ANKRD11Q6UB99 2663 aaPredicted RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 MKRN2OSH3BPM6 223 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 PRKYO43930 277 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 ATE1O95260 518 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 CD63P08962 238 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 ARFIP1P53367 373 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 PRSS12P56730 875 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 MAD2L1BPQ15013 274 aaPredicted RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 EBPQ15125 230 aaKnown RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 NDUFAF7Q7L592 441 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 MDGA2Q7Z553 956 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 OR2L13Q8N349 312 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 METTL25Q8N6Q8 603 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 OR5W2Q8NH69 310 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 C12orf43Q96C57 262 aaKnown RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 CNN2Q99439 309 aaKnown RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 STACQ99469 402 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 IRF2BPLQ9H1B7 796 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 SLC25A18Q9H1K4 315 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 PILRAQ9UKJ1 303 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 CAB39Q9Y376 341 aaPredicted RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 TLN1Q9Y490 2541 aaKnown RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.41□□□□□ -0.74
SNX13-202ENST00000409604 hCG_1807616A0A1W2PRN6 198 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 TNFSF11O14788 317 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 PSMA3P25788 255 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 PMP22Q01453 160 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 ZNF773Q6PK81 442 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 PLXDC2Q6UX71 529 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 TMEM178AQ8NBL3 297 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 MORN4Q8NDC4 146 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 TRMT10AQ8TBZ6 339 aaKnown RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 RPL3LQ92901 407 aaKnown RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 HHATLQ9HCP6 504 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 OSGIN1Q9UJX0 560 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 ZNF337Q9Y3M9 751 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 ANAPC1Q9H1A4 1944 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 A0A1B0GVI7 797 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 SLC22A31A6NKX4 558 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 ITGAMP11215 1152 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 S1PR1P21453 382 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 ENTPD1P49961 510 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 P2RX1P51575 399 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 CAV3P56539 151 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 AP1ARQ63HQ0 302 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 KTI12Q96EK9 354 aaPredicted RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 RASL10BQ96S79 203 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 MND1Q9BWT6 205 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 SIRT5Q9NXA8 310 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 GPC6Q9Y625 555 aaPredicted RBP10.41□□□□□ -0.74
SNX13-202ENST00000409604 RALGAPA1Q6GYQ0 2036 aa10.41□□□□□ -0.74
SNX13-202ENST00000409604 TRGV8A0A0C4DH27 118 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 A0A1W2PQ72 361 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 A0A1W2PRQ8 180 aa10.4□□□□□ -0.74
SNX13-202ENST00000409604 IRGMA1A4Y4 181 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 731.7 ms