RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 UMPSP11172 480 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CBLP22681 906 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TIMP3P35625 211 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RBM34P42696 430 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR2B6P58173 313 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CHRNB3Q05901 458 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PMPCAQ10713 525 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FOXF2Q12947 444 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 KPNB1Q14974 876 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR7A5Q15622 319 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SGCBQ16585 318 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FAM98BQ52LJ0 330 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PDSS1Q5T2R2 415 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RIPPLY2Q5TAB7 128 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PODNL1Q6PEZ8 512 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TTC33Q6PID6 262 aaPredicted RBP11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TBPL2Q6SJ96 375 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CCDC103Q8IW40 242 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 GCNT2Q8N0V5 402 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR4C15Q8NGM1 316 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR6S1Q8NH40 331 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MFSD8Q8NHS3 518 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ABHD3Q8WU67 409 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TMEM239Q8WW34 195 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 DUS3LQ96G46 650 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FNDC11Q9BVV2 318 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CHID1Q9BWS9 393 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SLC19A3Q9BZV2 496 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CCM2LQ9NUG4 571 aaPredicted RBP11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PAQR5Q9NXK6 330 aaPredicted RBP11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SELENONQ9NZV5 590 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 Q9UFV3 132 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 AURKCQ9UQB9 309 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SLC5A6Q9Y289 635 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF716A6NP11 495 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CYTIPO60759 359 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZG16O60844 167 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CIB2O75838 187 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 AKR7A3O95154 331 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RCBTB2O95199 551 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SYNGR4O95473 234 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 STAMBPO95630 424 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ITGA2P17301 1181 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FUT1P19526 365 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RRM2P31350 389 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ACTR3P61158 418 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CSNK2A1P68400 391 aaPredicted RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SLC35A1P78382 337 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SPIBQ01892 262 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PPP1R8Q12972 351 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF74Q16587 644 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FAM69AQ5T7M9 428 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 C5orf46Q6UWT4 87 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FCRLAQ7L513 359 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CHMP1BQ7LBR1 199 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CYP4Z1Q86W10 505 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MEX3DQ86XN8 651 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CCDC71Q8IV32 467 aaPredicted RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 LIX1LQ8IVB5 337 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TMEM99Q8N816 258 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR52J3Q8NH60 311 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ACOT11Q8WXI4 607 aaPredicted RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 POP5Q969H6 163 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PSD2Q9BQI7 771 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ANKRD19PQ9H560 264 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 DENND2DQ9H6A0 471 aaPredicted RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MCTS1Q9ULC4 181 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CLEC4AQ9UMR7 237 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RNF6Q9Y252 685 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FAM32AQ9Y421 112 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 LYVE1Q9Y5Y7 322 aa11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 INTS1Q8N201 2190 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 GCN1Q92616 2671 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB1-203ENST00000399082 A0A1W2PNV4 684 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 WIPF3A6NGB9 483 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ERICH4A6NGS2 130 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 AQP7P3A6NL99 342 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 M0R082 166 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TNFSF13O75888 250 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CH25HO95992 272 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 IGF2P01344 180 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MAKP20794 623 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 GRPRP30550 384 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 KIR2DL2P43627 348 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 HMGA2P52926 109 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CTBP2P56545 445 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SF3B4Q15427 424 aaKnown RBP eCLIP11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 EXOC3L2Q2M3D2 409 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FGD3Q5JSP0 725 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TMEM211Q6ICI0 200 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR2T5Q6IEZ7 315 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PPP4R4Q6NUP7 873 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PAQR6Q6TCH4 344 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TMEM179BQ7Z7N9 219 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 NRMQ8IXM6 262 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 LRRC17Q8N6Y2 441 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR2T29Q8NH02 315 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF417Q8TAU3 575 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ITLN2Q8WWU7 325 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 INTS12Q96CB8 462 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms