RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 BCAS1O75363 584 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SDHAP31040 664 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ALDH3B2P48448 385 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PRKCDQ05655 676 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 FGL1Q08830 312 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PUM1Q14671 1186 aaKnown RBP eCLIP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZER1Q7Z7L7 766 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TOMM5Q8N4H5 51 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 FRMD1Q8N878 549 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 WDR76Q9H967 626 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 GNG8Q9UK08 70 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SLC7A11Q9UPY5 501 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PCDHGA6Q9Y5G7 932 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 A0A1B0GWA3 101 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 LRRN3E7EW58 273 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SULT1B1O43704 296 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 GASTP01350 101 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PTPN6P29350 595 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 C21orf33P30042 268 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PITPNBP48739 271 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 FGFBP1Q14512 234 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 HBMQ6B0K9 141 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 VN1R4Q7Z5H5 301 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 C16orf52Q8NHV5 167 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 HOXB13Q92826 284 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TGIF2Q9GZN2 237 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 FBXO8Q9NRD0 319 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 GPATCH2Q9NW75 528 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ETV7Q9Y603 341 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 H3BMQ9 156 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TEX46H3BTG2 121 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 KHDRBS3O75525 346 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 RAB3BP20337 219 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CTBP2P56545 445 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CLRN1P58418 232 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZIC1Q15915 447 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 EIF2S3LQ2VIR3 472 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SYT14P1Q58G82 188 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 KLHL17Q6TDP4 642 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PXKQ7Z7A4 578 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR6S1Q8NH40 331 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SPACA9Q96E40 222 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SEC61A2Q9H9S3 476 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZBTB20Q9HC78 741 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 HIF3AQ9Y2N7 669 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 A0A087WUJ7 227 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 FGF17O60258 216 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CTSVO60911 334 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SBK2P0C263 348 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZGLP1P0C6A0 271 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CKMT1AP12532 417 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF20P17024 532 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 MMP11P24347 488 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 MALLQ13021 153 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SNTB2Q13425 540 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 APOFQ13790 326 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PRICKLE4Q2TBC4 344 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 Q499Y3 187 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 C18orf63Q68DL7 685 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PLBD1Q6P4A8 553 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 RAB11FIP2Q7L804 512 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OVCH1Q7RTY7 1134 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 P4HA3Q7Z4N8 544 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 C1orf174Q8IYL3 243 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 Q8N402 240 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 UCN3Q969E3 161 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 UTP23Q9BRU9 249 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CCDC187A0A096LP49 1063 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PRAMEF33A0A0G2JMD5 474 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 A0A1W2PPV9 198 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PRAMEF10O60809 474 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TRAPPC6AO75865 159 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CH25HO95992 272 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 NUDT7P0C024 238 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 BMP1P13497 986 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TCN2P20062 427 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ERP29P30040 261 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR3A3P47888 321 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR3A2P47893 321 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SLC6A9P48067 706 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ID2Q02363 134 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 FUT7Q11130 342 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TPBGQ13641 420 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 HMBOX1Q6NT76 420 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 LHFPL3Q86UP9 236 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 GJC3Q8NFK1 279 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 RSPRY1Q96DX4 576 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 RPP25Q9BUL9 199 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ABCG5Q9H222 651 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 GPR83Q9NYM4 423 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 MYOTQ9UBF9 498 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 A0A075B6Q4 140 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 P2RX6O15547 441 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 RGS9O75916 674 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PVRP15151 417 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CASP6P55212 293 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SSBP1Q04837 148 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 GPR19Q15760 415 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 DEFB110Q30KQ9 67 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms