RNA–Protein interactions for RNA: ENST00000390735.2

MIR550A3-201, Transcript of microRNA 550a-3, humanhuman

BASIC

Gene MIR550A3, Length 95 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR550A3-201ENST00000390735 CLK1P49759 484 aaKnown RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 CCNG1P51959 295 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 PRKAG1P54619 331 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 SH3BGRP55822 239 aaPredicted RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 OR2B6P58173 313 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 RPS23P62266 143 aaKnown RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 RAE1P78406 368 aaKnown RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 LCP2Q13094 533 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 TRAF3Q13114 568 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 CBFBQ13951 182 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 FXNQ16595 210 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 NKPD1Q17RQ9 610 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 GGTA1PQ4G0N0 100 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 CASC10Q5T4H9 136 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 GKAP1Q5VSY0 366 aaPredicted RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 CAVIN1Q6NZI2 390 aaKnown RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 TMEM154Q6P9G4 183 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 BRD3OSQ6XYD6 125 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 Q6ZTK2 550 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 LINGO2Q7L985 606 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 ZBED8Q8IZ13 594 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 PDIK1LQ8N165 341 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 TMCO5AQ8N6Q1 288 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 COX18Q8N8Q8 333 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 OR4F6Q8NGB9 312 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 RHEBL1Q8TAI7 183 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 SSMEM1Q8WWF3 244 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 SELENOMQ8WWX9 145 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 TMEM234Q8WY98 164 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 MAGOHBQ96A72 148 aaKnown RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 DNAJA3Q96EY1 480 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 MARS2Q96GW9 593 aaKnown RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 ZNF385AQ96PM9 386 aaKnown RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 NAA11Q9BSU3 229 aaPredicted RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 THUMPD3Q9BV44 507 aaKnown RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 BTBD2Q9BX70 525 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 LAT2Q9GZY6 243 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 NPHS2Q9NP85 383 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 MIEF1Q9NQG6 463 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 ACER3Q9NUN7 267 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 GIN1Q9NXP7 522 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 TMEM181Q9P2C4 612 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 RNF14Q9UBS8 474 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 GPR160Q9UJ42 338 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 FZR1Q9UM11 496 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 SNX6Q9UNH7 406 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 SPIN1Q9Y657 262 aaPredicted RBP4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 U3KQK5 164 aa4.28□□□□□ -1.72
MIR550A3-201ENST00000390735 RYR1P21817 5038 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 TRAV40A0A0B4J280 105 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ZNF816-ZNF321PA0A0X1KG74 233 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 CCDC189A1A4V9 331 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 GOLGA6L22H0YM25 854 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 TPD52L2O43399 206 aaKnown RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 UPK3AO75631 287 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 RSL1D1O76021 490 aaKnown RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 NHLRC4P0CG21 123 aaPredicted RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 UBL4AP11441 157 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 BCKDHAP12694 445 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 HSD3B1P14060 373 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 CHN1P15882 459 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ATP6V1C1P21283 382 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 HSD3B2P26439 372 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 APOBEC1P41238 236 aaKnown RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 GSTM5P46439 218 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 CCR4P51679 360 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ATP12AP54707 1039 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 BPIFB3P59826 476 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 SLC35A1P78382 337 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 POU6F2P78424 691 aaPredicted RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ARF1P84077 181 aaKnown RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ROR2Q01974 943 aaKnown RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 EGR3Q06889 387 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 C2orf80Q0P641 193 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 DBPQ10586 325 aaPredicted RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 HSPB3Q12988 150 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 HERPUD1Q15011 391 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 TRMT5Q32P41 509 aaKnown RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ALKBH6Q3KRA9 238 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 NRN1LQ496H8 165 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ATP6AP1LQ52LC2 224 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 CDC73Q6P1J9 531 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ZCCHC12Q6PEW1 402 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 CCDC137Q6PK04 289 aaKnown RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 LRRN1Q6UXK5 716 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 Q6ZSV7 163 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 RAPH1Q70E73 1250 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ZNF551Q7Z340 670 aaPredicted RBP4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 MDP1Q86V88 176 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 CCDC36Q8IYA8 594 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 C1orf174Q8IYL3 243 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 OR9K2Q8NGE7 335 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 TBC1D15Q8TC07 691 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ADAMTS15Q8TE58 950 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 CCL17Q92583 94 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 ITPKCQ96DU7 683 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 GIMAP5Q96F15 307 aa4.27□□□□□ -1.73
MIR550A3-201ENST00000390735 OTUB1Q96FW1 271 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms