RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 SHANK1Q9Y566 2161 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 ALDOCP09972 364 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 HTR6P50406 440 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 PER3P56645 1201 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 HEPHL1Q6MZM0 1159 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 SPNS1Q9H2V7 528 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 HOXC11O43248 304 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 DUSP11O75319 330 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 GASTP01350 101 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 MELKQ14680 651 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 MOB1BQ7L9L4 216 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 MEX3DQ86XN8 651 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 UEVLDQ8IX04 471 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 CELF5Q8N6W0 485 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 SUMO1P63165 101 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 CD300LGQ6UXG3 332 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 C3orf30Q96M34 536 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 TSSK2Q96PF2 358 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 SCML1Q9UN30 329 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 FAM96BQ9Y3D0 163 aa11.62□□□□□ -0.55
SRGAP3-202ENST00000383836 TRABD2BA6NFA1 517 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 A6NLC8 198 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 SCO1O75880 301 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 ECI1P42126 302 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 SLC1A3P43003 542 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 KANSL1Q7Z3B3 1105 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 SLC12A9Q9BXP2 914 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 SLC6A14Q9UN76 642 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 RNF212BA8MTL3 300 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 ADAM23O75077 832 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 ADH1BP00325 375 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 GYPBP06028 91 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 RAB1AP62820 205 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 SQSTM1Q13501 440 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 CNN3Q15417 329 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 KLHDC8AQ8IYD2 350 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 ADGRF3Q8IZF5 1079 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 FAM71F1Q96KD3 344 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 TRDV1A0A1B0GX56 115 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 FAM183AA6NL82 134 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 TOX4O94842 621 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 THBS1P07996 1170 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 RNH1P13489 461 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 STEAP1BQ6NZ63 245 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 MDGA2Q7Z553 956 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 LIX1LQ8IVB5 337 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 NPRL2Q8WTW4 380 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 OR52D1Q9H346 318 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 EGLN3Q9H6Z9 239 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 ZNF160Q9HCG1 818 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 GAR1Q9NY12 217 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 B4DXG7 233 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 GPR32O75388 356 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 EFNA3P52797 238 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 EMP2P54851 167 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 TOLLIPQ9H0E2 274 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 CWH43Q9H720 699 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 PTPRZ1P23471 2315 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 CNOT1A5YKK6 2376 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 KDM4FA0A1W2PPD8 638 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 HCRTO43612 131 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 DLX2Q07687 328 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 GRM7Q14831 915 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 HYAL4Q2M3T9 481 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 KIAA0319Q5VV43 1072 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 TMEM88Q6PEY1 159 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 CMTM8Q8IZV2 173 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 NPWQ8N729 165 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 ANKRD9Q96BM1 317 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 PTCHD1Q96NR3 888 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 NOTCH3Q9UM47 2321 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 KIAA1551Q9HCM1 1747 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 TRBV4-1A0A0J9YWV2 114 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 CPNE6O95741 557 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 CFIP05156 583 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 TMEM31Q5JXX7 168 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 Q6ZVL8 140 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 KREMEN2Q8NCW0 462 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 AKR7LQ8NHP1 331 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 CPNE4Q96A23 557 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 MAP6Q96JE9 813 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 NTMT1Q9BV86 223 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 ZCCHC4Q9H5U6 513 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 PLXNA1Q9UIW2 1896 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 SOWAHBA6NEL2 793 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 RTCAO00442 366 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 HMGCLP35914 325 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 OR1S2Q8NGQ3 325 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 KLRG1Q96E93 195 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 SLC22A7Q9Y694 548 aa11.61□□□□□ -0.55
SRGAP3-202ENST00000383836 TAF1P21675 1872 aa11.6□□□□□ -0.55
SRGAP3-202ENST00000383836 DCTN6O00399 190 aa11.6□□□□□ -0.55
SRGAP3-202ENST00000383836 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
SRGAP3-202ENST00000383836 TRHRP34981 398 aaPredicted RBP11.6□□□□□ -0.55
SRGAP3-202ENST00000383836 RING1Q06587 406 aa11.6□□□□□ -0.55
SRGAP3-202ENST00000383836 OR52W1Q6IF63 320 aa11.6□□□□□ -0.55
SRGAP3-202ENST00000383836 CD200R1Q8TD46 325 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms