RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 CFAP52Q8N1V2 620 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 NRSN2Q9GZP1 204 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 SEC61A2Q9H9S3 476 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 TRPV4Q9HBA0 871 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 TMEM27Q9HBJ8 222 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 GKN1Q9NS71 199 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 TP53TG5Q9Y2B4 290 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 GOLGA4Q13439 2230 aaKnown RBP13.88□□□□□ -0.19
VLDLR-202ENST00000382099 MARCH11A6NNE9 402 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 TMEM189-UBE2V1I3L0A0 370 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 MOSPD3O75425 235 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 RHOQP17081 205 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 AWAT1Q58HT5 328 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 ZNF805Q5CZA5 627 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 C10orf91Q5T1B1 145 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 PRAMEF17Q5VTA0 474 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 ZNF385CQ66K41 422 aaPredicted RBP13.88□□□□□ -0.19
VLDLR-202ENST00000382099 OLFML2AQ68BL7 652 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 OR6J1Q8NGC5 347 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 IGSF8Q969P0 613 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 S100A16Q96FQ6 103 aaKnown RBP13.88□□□□□ -0.19
VLDLR-202ENST00000382099 C4orf36Q96KX1 117 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 RGCCQ9H4X1 137 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 TMEM38AQ9H6F2 299 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 BCO1Q9HAY6 547 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 FAM212BQ9NTI7 297 aaPredicted RBP13.88□□□□□ -0.19
VLDLR-202ENST00000382099 CRLS1Q9UJA2 301 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 ANKRD20A5PA0PJZ0 165 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 CPED1A4D0V7 1026 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 MAGEB4O15481 346 aaPredicted RBP13.88□□□□□ -0.19
VLDLR-202ENST00000382099 PRAMEF4O60810 478 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 RBBP9O75884 186 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 ETHE1O95571 254 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 MT-ND5P03915 603 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 BUD31P41223 144 aaPredicted RBP13.88□□□□□ -0.19
VLDLR-202ENST00000382099 CSNK1DP48730 415 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 LSM6P62312 80 aaKnown RBP13.88□□□□□ -0.19
VLDLR-202ENST00000382099 PRAMEF9Q5VWM5 478 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 ACOT7LQ6ZUV0 252 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 GAREM2Q75VX8 874 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 NRROSQ86YC3 692 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 SYNPRQ8TBG9 265 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 SLC38A5Q8WUX1 472 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 DVL3Q92997 716 aaPredicted RBP13.88□□□□□ -0.19
VLDLR-202ENST00000382099 ASB16Q96NS5 453 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 SELENOIQ9C0D9 397 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 CHST5Q9GZS9 411 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 SGK2Q9HBY8 427 aa13.88□□□□□ -0.19
VLDLR-202ENST00000382099 GDF2Q9UK05 429 aaPredicted RBP13.88□□□□□ -0.19
VLDLR-202ENST00000382099 C7orf77A4D0Y5 90 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 PPM1DO15297 605 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 EMC8O43402 210 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 SBK2P0C263 348 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 CASRP41180 1078 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 CDX1P47902 265 aaPredicted RBP13.87□□□□□ -0.19
VLDLR-202ENST00000382099 P2RX1P51575 399 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 CXADRP78310 365 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 TNFRSF9Q07011 255 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 SLC25A30Q5SVS4 291 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 YOD1Q5VVQ6 348 aaPredicted RBP13.87□□□□□ -0.19
VLDLR-202ENST00000382099 LIPJQ5W064 366 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 NSUN5P2Q63ZY6 315 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 C11orf87Q6NUJ2 197 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 RNF165Q6ZSG1 346 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 TOP6BLQ8N6T0 577 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 SLC25A38Q96DW6 304 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 GAL3ST4Q96RP7 486 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 PARPBPQ9NWS1 579 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 PDCD11Q14690 1871 aaKnown RBP13.87□□□□□ -0.19
VLDLR-202ENST00000382099 A0A1W2PPE2 198 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 KDM4EB2RXH2 506 aaPredicted RBP13.87□□□□□ -0.19
VLDLR-202ENST00000382099 RAB3DO95716 219 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 CLTBP09497 229 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 GAAP10253 952 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 TPT1P13693 172 aaKnown RBP13.87□□□□□ -0.19
VLDLR-202ENST00000382099 GTF2F2P13984 249 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 PRKXP51817 358 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 ATP1B3P54709 279 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 NRG3P56975 720 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 NHLH2Q02577 135 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 CCL14Q16627 93 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 RAB41Q5JT25 222 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 OR7G2Q8NG99 324 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 OR4C16Q8NGL9 310 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 PPP1R1CQ8WVI7 109 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 FBXO4Q9UKT5 387 aa13.87□□□□□ -0.19
VLDLR-202ENST00000382099 A0A0D9SEW6 157 aa13.86□□□□□ -0.19
VLDLR-202ENST00000382099 RNASET2O00584 256 aaKnown RBP13.86□□□□□ -0.19
VLDLR-202ENST00000382099 CLDN11O75508 207 aa13.86□□□□□ -0.19
VLDLR-202ENST00000382099 IFNA10P01566 189 aa13.86□□□□□ -0.19
VLDLR-202ENST00000382099 HOXB5P09067 269 aa13.86□□□□□ -0.19
VLDLR-202ENST00000382099 QDPRP09417 244 aa13.86□□□□□ -0.19
VLDLR-202ENST00000382099 HOXA5P20719 270 aa13.86□□□□□ -0.19
VLDLR-202ENST00000382099 GJA4P35212 333 aa13.86□□□□□ -0.19
VLDLR-202ENST00000382099 GSK3AP49840 483 aa13.86□□□□□ -0.19
VLDLR-202ENST00000382099 PCBP3P57721 371 aaKnown RBP13.86□□□□□ -0.19
VLDLR-202ENST00000382099 OR12D2P58182 307 aa13.86□□□□□ -0.19
VLDLR-202ENST00000382099 EFEMP1Q12805 493 aa13.86□□□□□ -0.19
VLDLR-202ENST00000382099 ETFRF1Q6IPR1 90 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms